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On the current status of Phakopsora pachyrhizi genome sequencing

Recent advances in the field of sequencing technologies and bioinformatics allow a more rapid access to genomes of non-model organisms at sinking costs. Accordingly, draft genomes of several economically important cereal rust fungi have been released in the last 3 years. Aside from the very recent f...

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Detalles Bibliográficos
Autores principales: Loehrer, Marco, Vogel, Alexander, Huettel, Bruno, Reinhardt, Richard, Benes, Vladimir, Duplessis, Sébastien, Usadel, Björn, Schaffrath, Ulrich
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4147182/
https://www.ncbi.nlm.nih.gov/pubmed/25221558
http://dx.doi.org/10.3389/fpls.2014.00377
Descripción
Sumario:Recent advances in the field of sequencing technologies and bioinformatics allow a more rapid access to genomes of non-model organisms at sinking costs. Accordingly, draft genomes of several economically important cereal rust fungi have been released in the last 3 years. Aside from the very recent flax rust and poplar rust draft assemblies there are no genomic data available for other dicot-infecting rust fungi. In this article we outline rust fungus sequencing efforts and comment on the current status of Phakopsora pachyrhizi (Asian soybean rust) genome sequencing.