On the current status of Phakopsora pachyrhizi genome sequencing

Recent advances in the field of sequencing technologies and bioinformatics allow a more rapid access to genomes of non-model organisms at sinking costs. Accordingly, draft genomes of several economically important cereal rust fungi have been released in the last 3 years. Aside from the very recent f...

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Autores principales: Loehrer, Marco, Vogel, Alexander, Huettel, Bruno, Reinhardt, Richard, Benes, Vladimir, Duplessis, Sébastien, Usadel, Björn, Schaffrath, Ulrich
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2014
Materias:
Plant Science
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4147182/
https://www.ncbi.nlm.nih.gov/pubmed/25221558
http://dx.doi.org/10.3389/fpls.2014.00377
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author Loehrer, Marco
Vogel, Alexander
Huettel, Bruno
Reinhardt, Richard
Benes, Vladimir
Duplessis, Sébastien
Usadel, Björn
Schaffrath, Ulrich
author_facet Loehrer, Marco
Vogel, Alexander
Huettel, Bruno
Reinhardt, Richard
Benes, Vladimir
Duplessis, Sébastien
Usadel, Björn
Schaffrath, Ulrich
author_sort Loehrer, Marco
collection PubMed
description Recent advances in the field of sequencing technologies and bioinformatics allow a more rapid access to genomes of non-model organisms at sinking costs. Accordingly, draft genomes of several economically important cereal rust fungi have been released in the last 3 years. Aside from the very recent flax rust and poplar rust draft assemblies there are no genomic data available for other dicot-infecting rust fungi. In this article we outline rust fungus sequencing efforts and comment on the current status of Phakopsora pachyrhizi (Asian soybean rust) genome sequencing.
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spelling pubmed-41471822014-09-12 On the current status of Phakopsora pachyrhizi genome sequencing Loehrer, Marco Vogel, Alexander Huettel, Bruno Reinhardt, Richard Benes, Vladimir Duplessis, Sébastien Usadel, Björn Schaffrath, Ulrich Front Plant Sci Plant Science Recent advances in the field of sequencing technologies and bioinformatics allow a more rapid access to genomes of non-model organisms at sinking costs. Accordingly, draft genomes of several economically important cereal rust fungi have been released in the last 3 years. Aside from the very recent flax rust and poplar rust draft assemblies there are no genomic data available for other dicot-infecting rust fungi. In this article we outline rust fungus sequencing efforts and comment on the current status of Phakopsora pachyrhizi (Asian soybean rust) genome sequencing. Frontiers Media S.A. 2014-08-27 /pmc/articles/PMC4147182/ /pubmed/25221558 http://dx.doi.org/10.3389/fpls.2014.00377 Text en Copyright © 2014 Loehrer, Vogel, Huettel, Reinhardt, Benes, Duplessis, Usadel and Schaffrath. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Loehrer, Marco
Vogel, Alexander
Huettel, Bruno
Reinhardt, Richard
Benes, Vladimir
Duplessis, Sébastien
Usadel, Björn
Schaffrath, Ulrich
On the current status of Phakopsora pachyrhizi genome sequencing
title On the current status of Phakopsora pachyrhizi genome sequencing
title_full On the current status of Phakopsora pachyrhizi genome sequencing
title_fullStr On the current status of Phakopsora pachyrhizi genome sequencing
title_full_unstemmed On the current status of Phakopsora pachyrhizi genome sequencing
title_short On the current status of Phakopsora pachyrhizi genome sequencing
title_sort on the current status of phakopsora pachyrhizi genome sequencing
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4147182/
https://www.ncbi.nlm.nih.gov/pubmed/25221558
http://dx.doi.org/10.3389/fpls.2014.00377
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