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Characterization of the Intergenic Spacer rDNAs of Two Pig Nodule Worms, Oesophagostomum dentatum and O. quadrispinulatum

The characteristics of the intergenic spacer rDNAs (IGS rDNAs) of Oesophagostomum dentatum and O. quadrispinulatum isolated from pigs in different geographical locations in Mainland China were determined, and the phylogenetic relationships of the two species were reconstructed using the IGS rDNA seq...

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Autores principales: Lin, Rui-Qing, Shu, Li, Zhao, Guang-Hui, Cheng, Tian, Zou, Shang-Shu, Zhang, Yuan, Weng, Ya-Biao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4147281/
https://www.ncbi.nlm.nih.gov/pubmed/25197691
http://dx.doi.org/10.1155/2014/147963
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author Lin, Rui-Qing
Shu, Li
Zhao, Guang-Hui
Cheng, Tian
Zou, Shang-Shu
Zhang, Yuan
Weng, Ya-Biao
author_facet Lin, Rui-Qing
Shu, Li
Zhao, Guang-Hui
Cheng, Tian
Zou, Shang-Shu
Zhang, Yuan
Weng, Ya-Biao
author_sort Lin, Rui-Qing
collection PubMed
description The characteristics of the intergenic spacer rDNAs (IGS rDNAs) of Oesophagostomum dentatum and O. quadrispinulatum isolated from pigs in different geographical locations in Mainland China were determined, and the phylogenetic relationships of the two species were reconstructed using the IGS rDNA sequences. The organization of the IGS rDNA sequences was similar to their organization in other eukaryotes. The 28S-18S IGS rDNA sequences of both O. dentatum and O. quadrispinulatum were found to have variable lengths, that is, 759–762 bp and 937–1128 bp, respectively. All of the sequences contained direct repeats and inverted repeats. The length polymorphisms were related to the different numbers and organization of repetitive elements. Different types and numbers of repeats were found between the two pig nodule species, and two IGS structures were found within O. quadrispinulatum. Phylogenetic analysis showed that all O. dentatum isolates were clustered into one clade, but O. quadrispinulatum isolates from different origins were grouped into two distinct clusters. These results suggested independent species and the existence of genotypes or subspecies within pig nodule worms. Different types and numbers of repeats and IGS rDNA structures could serve as potential markers for differentiating these two species of pig nodule worms.
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spelling pubmed-41472812014-09-07 Characterization of the Intergenic Spacer rDNAs of Two Pig Nodule Worms, Oesophagostomum dentatum and O. quadrispinulatum Lin, Rui-Qing Shu, Li Zhao, Guang-Hui Cheng, Tian Zou, Shang-Shu Zhang, Yuan Weng, Ya-Biao ScientificWorldJournal Research Article The characteristics of the intergenic spacer rDNAs (IGS rDNAs) of Oesophagostomum dentatum and O. quadrispinulatum isolated from pigs in different geographical locations in Mainland China were determined, and the phylogenetic relationships of the two species were reconstructed using the IGS rDNA sequences. The organization of the IGS rDNA sequences was similar to their organization in other eukaryotes. The 28S-18S IGS rDNA sequences of both O. dentatum and O. quadrispinulatum were found to have variable lengths, that is, 759–762 bp and 937–1128 bp, respectively. All of the sequences contained direct repeats and inverted repeats. The length polymorphisms were related to the different numbers and organization of repetitive elements. Different types and numbers of repeats were found between the two pig nodule species, and two IGS structures were found within O. quadrispinulatum. Phylogenetic analysis showed that all O. dentatum isolates were clustered into one clade, but O. quadrispinulatum isolates from different origins were grouped into two distinct clusters. These results suggested independent species and the existence of genotypes or subspecies within pig nodule worms. Different types and numbers of repeats and IGS rDNA structures could serve as potential markers for differentiating these two species of pig nodule worms. Hindawi Publishing Corporation 2014 2014-08-13 /pmc/articles/PMC4147281/ /pubmed/25197691 http://dx.doi.org/10.1155/2014/147963 Text en Copyright © 2014 Rui-Qing Lin et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Lin, Rui-Qing
Shu, Li
Zhao, Guang-Hui
Cheng, Tian
Zou, Shang-Shu
Zhang, Yuan
Weng, Ya-Biao
Characterization of the Intergenic Spacer rDNAs of Two Pig Nodule Worms, Oesophagostomum dentatum and O. quadrispinulatum
title Characterization of the Intergenic Spacer rDNAs of Two Pig Nodule Worms, Oesophagostomum dentatum and O. quadrispinulatum
title_full Characterization of the Intergenic Spacer rDNAs of Two Pig Nodule Worms, Oesophagostomum dentatum and O. quadrispinulatum
title_fullStr Characterization of the Intergenic Spacer rDNAs of Two Pig Nodule Worms, Oesophagostomum dentatum and O. quadrispinulatum
title_full_unstemmed Characterization of the Intergenic Spacer rDNAs of Two Pig Nodule Worms, Oesophagostomum dentatum and O. quadrispinulatum
title_short Characterization of the Intergenic Spacer rDNAs of Two Pig Nodule Worms, Oesophagostomum dentatum and O. quadrispinulatum
title_sort characterization of the intergenic spacer rdnas of two pig nodule worms, oesophagostomum dentatum and o. quadrispinulatum
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4147281/
https://www.ncbi.nlm.nih.gov/pubmed/25197691
http://dx.doi.org/10.1155/2014/147963
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