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Characterisation of a Plancitoxin-1-Like DNase II Gene in Trichinella spiralis
BACKGROUND: Deoxyribonuclease II (DNase II) is a well-known acidic endonuclease that catalyses the degradation of DNA into oligonucleotides. Only one or a few genes encoding DNase II have been observed in the genomes of many species. 125 DNase II-like protein family genes were predicted in the Trich...
Autores principales: | , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4148230/ https://www.ncbi.nlm.nih.gov/pubmed/25165857 http://dx.doi.org/10.1371/journal.pntd.0003097 |
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author | Liao, Chengshui Liu, Mingyuan Bai, Xue Liu, Pan Wang, Xuelin Li, Tingting Tang, Bin Gao, He Sun, Qingsong Liu, Xidong Zhao, Ying Wang, Feng Wu, Xiuping Boireau, Pascal Liu, Xiaolei |
author_facet | Liao, Chengshui Liu, Mingyuan Bai, Xue Liu, Pan Wang, Xuelin Li, Tingting Tang, Bin Gao, He Sun, Qingsong Liu, Xidong Zhao, Ying Wang, Feng Wu, Xiuping Boireau, Pascal Liu, Xiaolei |
author_sort | Liao, Chengshui |
collection | PubMed |
description | BACKGROUND: Deoxyribonuclease II (DNase II) is a well-known acidic endonuclease that catalyses the degradation of DNA into oligonucleotides. Only one or a few genes encoding DNase II have been observed in the genomes of many species. 125 DNase II-like protein family genes were predicted in the Trichinella spiralis (T. spiralis) genome; however, none have been confirmed. DNase II is a monomeric nuclease that contains two copies of a variant HKD motif in the N- and C-termini. Of these 125 genes, only plancitoxin-1 (1095 bp, GenBank accession no. XM_003370715.1) contains the HKD motif in its C-terminus domain. METHODOLOGY/PRINCIPAL FINDINGS: In this study, we cloned and characterised the plancitoxin-1 gene. However, the sequences of plancitoxin-1 cloned from T. spiralis were shorter than the predicted sequences in GenBank. Intriguingly, there were two HKD motifs in the N- and C-termini in the cloned sequences. Therefore, the gene with shorter sequences was named after plancitoxin-1-like (Ts-Pt, 885 bp) and has been deposited in GenBank under accession number KF984291. The recombinant protein (rTs-Pt) was expressed in a prokaryotic expression system and purified by nickel affinity chromatography. Western blot analysis showed that rTs-Pt was recognised by serum from T. spiralis-infected mice; the anti-rTs-Pt serum recognised crude antigens but not ES antigens. The Ts-Pt gene was examined at all T. spiralis developmental stages by real-time quantitative PCR. Immunolocalisation analysis showed that Ts-Pt was distributed throughout newborn larvae (NBL), the tegument of adults (Ad) and muscle larvae (ML). As demonstrated by DNase zymography, the expressed proteins displayed cation-independent DNase activity. rTs-Pt had a narrow optimum pH range in slightly acidic conditions (pH 4 and pH 5), and its optimum temperature was 25°C, 30°C, and 37°C. CONCLUSIONS: This study indicated that Ts-Pt was classified as a somatic protein in different T. spiralis developmental stages, and demonstrated for the first time that an expressed DNase II protein from T. spiralis had nuclease activity. |
format | Online Article Text |
id | pubmed-4148230 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-41482302014-08-29 Characterisation of a Plancitoxin-1-Like DNase II Gene in Trichinella spiralis Liao, Chengshui Liu, Mingyuan Bai, Xue Liu, Pan Wang, Xuelin Li, Tingting Tang, Bin Gao, He Sun, Qingsong Liu, Xidong Zhao, Ying Wang, Feng Wu, Xiuping Boireau, Pascal Liu, Xiaolei PLoS Negl Trop Dis Research Article BACKGROUND: Deoxyribonuclease II (DNase II) is a well-known acidic endonuclease that catalyses the degradation of DNA into oligonucleotides. Only one or a few genes encoding DNase II have been observed in the genomes of many species. 125 DNase II-like protein family genes were predicted in the Trichinella spiralis (T. spiralis) genome; however, none have been confirmed. DNase II is a monomeric nuclease that contains two copies of a variant HKD motif in the N- and C-termini. Of these 125 genes, only plancitoxin-1 (1095 bp, GenBank accession no. XM_003370715.1) contains the HKD motif in its C-terminus domain. METHODOLOGY/PRINCIPAL FINDINGS: In this study, we cloned and characterised the plancitoxin-1 gene. However, the sequences of plancitoxin-1 cloned from T. spiralis were shorter than the predicted sequences in GenBank. Intriguingly, there were two HKD motifs in the N- and C-termini in the cloned sequences. Therefore, the gene with shorter sequences was named after plancitoxin-1-like (Ts-Pt, 885 bp) and has been deposited in GenBank under accession number KF984291. The recombinant protein (rTs-Pt) was expressed in a prokaryotic expression system and purified by nickel affinity chromatography. Western blot analysis showed that rTs-Pt was recognised by serum from T. spiralis-infected mice; the anti-rTs-Pt serum recognised crude antigens but not ES antigens. The Ts-Pt gene was examined at all T. spiralis developmental stages by real-time quantitative PCR. Immunolocalisation analysis showed that Ts-Pt was distributed throughout newborn larvae (NBL), the tegument of adults (Ad) and muscle larvae (ML). As demonstrated by DNase zymography, the expressed proteins displayed cation-independent DNase activity. rTs-Pt had a narrow optimum pH range in slightly acidic conditions (pH 4 and pH 5), and its optimum temperature was 25°C, 30°C, and 37°C. CONCLUSIONS: This study indicated that Ts-Pt was classified as a somatic protein in different T. spiralis developmental stages, and demonstrated for the first time that an expressed DNase II protein from T. spiralis had nuclease activity. Public Library of Science 2014-08-28 /pmc/articles/PMC4148230/ /pubmed/25165857 http://dx.doi.org/10.1371/journal.pntd.0003097 Text en © 2014 Liao et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Liao, Chengshui Liu, Mingyuan Bai, Xue Liu, Pan Wang, Xuelin Li, Tingting Tang, Bin Gao, He Sun, Qingsong Liu, Xidong Zhao, Ying Wang, Feng Wu, Xiuping Boireau, Pascal Liu, Xiaolei Characterisation of a Plancitoxin-1-Like DNase II Gene in Trichinella spiralis |
title | Characterisation of a Plancitoxin-1-Like DNase II Gene in Trichinella spiralis
|
title_full | Characterisation of a Plancitoxin-1-Like DNase II Gene in Trichinella spiralis
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title_fullStr | Characterisation of a Plancitoxin-1-Like DNase II Gene in Trichinella spiralis
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title_full_unstemmed | Characterisation of a Plancitoxin-1-Like DNase II Gene in Trichinella spiralis
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title_short | Characterisation of a Plancitoxin-1-Like DNase II Gene in Trichinella spiralis
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title_sort | characterisation of a plancitoxin-1-like dnase ii gene in trichinella spiralis |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4148230/ https://www.ncbi.nlm.nih.gov/pubmed/25165857 http://dx.doi.org/10.1371/journal.pntd.0003097 |
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