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Draft genome sequence of Dyadobacter tibetensis type strain (Y620-1) isolated from glacial ice

Dyadobacter tibetensis Y620-1 is the type strain of the species Dyadobacter tibetensis, isolated from ice at a depth of 59 m from a high altitude glacier in China (5670 m above sea level). It is psychrotolerant with growth temperature ranges of 4 to 35°C. Here we describe the features of this organi...

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Autores principales: Liu, Yongqin, Hu, Anyi, Shen, Liang, Yao, Tandong, Jiao, Nianzhi, Wang, Ninglian, Xu, Baiqing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Michigan State University 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4148984/
https://www.ncbi.nlm.nih.gov/pubmed/25197470
http://dx.doi.org/10.4056/sigs.5649756
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author Liu, Yongqin
Hu, Anyi
Shen, Liang
Yao, Tandong
Jiao, Nianzhi
Wang, Ninglian
Xu, Baiqing
author_facet Liu, Yongqin
Hu, Anyi
Shen, Liang
Yao, Tandong
Jiao, Nianzhi
Wang, Ninglian
Xu, Baiqing
author_sort Liu, Yongqin
collection PubMed
description Dyadobacter tibetensis Y620-1 is the type strain of the species Dyadobacter tibetensis, isolated from ice at a depth of 59 m from a high altitude glacier in China (5670 m above sea level). It is psychrotolerant with growth temperature ranges of 4 to 35°C. Here we describe the features of this organism, together with the draft genome sequence and annotation. The 5,313,963 bp long genome contains 4,828 protein-coding genes and 39 RNA genes. To the best of our knowledge, this is the first Dyadobacter strain that was isolated from glacial ice. This study provides genetic information of this organism to identify the genes linked to its specific mechanisms for adaption to extreme glacial environment.
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spelling pubmed-41489842014-09-05 Draft genome sequence of Dyadobacter tibetensis type strain (Y620-1) isolated from glacial ice Liu, Yongqin Hu, Anyi Shen, Liang Yao, Tandong Jiao, Nianzhi Wang, Ninglian Xu, Baiqing Stand Genomic Sci Short Genome Reports Dyadobacter tibetensis Y620-1 is the type strain of the species Dyadobacter tibetensis, isolated from ice at a depth of 59 m from a high altitude glacier in China (5670 m above sea level). It is psychrotolerant with growth temperature ranges of 4 to 35°C. Here we describe the features of this organism, together with the draft genome sequence and annotation. The 5,313,963 bp long genome contains 4,828 protein-coding genes and 39 RNA genes. To the best of our knowledge, this is the first Dyadobacter strain that was isolated from glacial ice. This study provides genetic information of this organism to identify the genes linked to its specific mechanisms for adaption to extreme glacial environment. Michigan State University 2014-03-15 /pmc/articles/PMC4148984/ /pubmed/25197470 http://dx.doi.org/10.4056/sigs.5649756 Text en Copyright © retained by original authors http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Genome Reports
Liu, Yongqin
Hu, Anyi
Shen, Liang
Yao, Tandong
Jiao, Nianzhi
Wang, Ninglian
Xu, Baiqing
Draft genome sequence of Dyadobacter tibetensis type strain (Y620-1) isolated from glacial ice
title Draft genome sequence of Dyadobacter tibetensis type strain (Y620-1) isolated from glacial ice
title_full Draft genome sequence of Dyadobacter tibetensis type strain (Y620-1) isolated from glacial ice
title_fullStr Draft genome sequence of Dyadobacter tibetensis type strain (Y620-1) isolated from glacial ice
title_full_unstemmed Draft genome sequence of Dyadobacter tibetensis type strain (Y620-1) isolated from glacial ice
title_short Draft genome sequence of Dyadobacter tibetensis type strain (Y620-1) isolated from glacial ice
title_sort draft genome sequence of dyadobacter tibetensis type strain (y620-1) isolated from glacial ice
topic Short Genome Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4148984/
https://www.ncbi.nlm.nih.gov/pubmed/25197470
http://dx.doi.org/10.4056/sigs.5649756
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