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Draft genome sequence of Dyadobacter tibetensis type strain (Y620-1) isolated from glacial ice
Dyadobacter tibetensis Y620-1 is the type strain of the species Dyadobacter tibetensis, isolated from ice at a depth of 59 m from a high altitude glacier in China (5670 m above sea level). It is psychrotolerant with growth temperature ranges of 4 to 35°C. Here we describe the features of this organi...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Michigan State University
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4148984/ https://www.ncbi.nlm.nih.gov/pubmed/25197470 http://dx.doi.org/10.4056/sigs.5649756 |
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author | Liu, Yongqin Hu, Anyi Shen, Liang Yao, Tandong Jiao, Nianzhi Wang, Ninglian Xu, Baiqing |
author_facet | Liu, Yongqin Hu, Anyi Shen, Liang Yao, Tandong Jiao, Nianzhi Wang, Ninglian Xu, Baiqing |
author_sort | Liu, Yongqin |
collection | PubMed |
description | Dyadobacter tibetensis Y620-1 is the type strain of the species Dyadobacter tibetensis, isolated from ice at a depth of 59 m from a high altitude glacier in China (5670 m above sea level). It is psychrotolerant with growth temperature ranges of 4 to 35°C. Here we describe the features of this organism, together with the draft genome sequence and annotation. The 5,313,963 bp long genome contains 4,828 protein-coding genes and 39 RNA genes. To the best of our knowledge, this is the first Dyadobacter strain that was isolated from glacial ice. This study provides genetic information of this organism to identify the genes linked to its specific mechanisms for adaption to extreme glacial environment. |
format | Online Article Text |
id | pubmed-4148984 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Michigan State University |
record_format | MEDLINE/PubMed |
spelling | pubmed-41489842014-09-05 Draft genome sequence of Dyadobacter tibetensis type strain (Y620-1) isolated from glacial ice Liu, Yongqin Hu, Anyi Shen, Liang Yao, Tandong Jiao, Nianzhi Wang, Ninglian Xu, Baiqing Stand Genomic Sci Short Genome Reports Dyadobacter tibetensis Y620-1 is the type strain of the species Dyadobacter tibetensis, isolated from ice at a depth of 59 m from a high altitude glacier in China (5670 m above sea level). It is psychrotolerant with growth temperature ranges of 4 to 35°C. Here we describe the features of this organism, together with the draft genome sequence and annotation. The 5,313,963 bp long genome contains 4,828 protein-coding genes and 39 RNA genes. To the best of our knowledge, this is the first Dyadobacter strain that was isolated from glacial ice. This study provides genetic information of this organism to identify the genes linked to its specific mechanisms for adaption to extreme glacial environment. Michigan State University 2014-03-15 /pmc/articles/PMC4148984/ /pubmed/25197470 http://dx.doi.org/10.4056/sigs.5649756 Text en Copyright © retained by original authors http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Short Genome Reports Liu, Yongqin Hu, Anyi Shen, Liang Yao, Tandong Jiao, Nianzhi Wang, Ninglian Xu, Baiqing Draft genome sequence of Dyadobacter tibetensis type strain (Y620-1) isolated from glacial ice |
title | Draft genome sequence of Dyadobacter tibetensis type strain (Y620-1) isolated from glacial ice |
title_full | Draft genome sequence of Dyadobacter tibetensis type strain (Y620-1) isolated from glacial ice |
title_fullStr | Draft genome sequence of Dyadobacter tibetensis type strain (Y620-1) isolated from glacial ice |
title_full_unstemmed | Draft genome sequence of Dyadobacter tibetensis type strain (Y620-1) isolated from glacial ice |
title_short | Draft genome sequence of Dyadobacter tibetensis type strain (Y620-1) isolated from glacial ice |
title_sort | draft genome sequence of dyadobacter tibetensis type strain (y620-1) isolated from glacial ice |
topic | Short Genome Reports |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4148984/ https://www.ncbi.nlm.nih.gov/pubmed/25197470 http://dx.doi.org/10.4056/sigs.5649756 |
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