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Genome sequence of the Listia angolensis microsymbiont Microvirga lotononidis strain WSM3557(T)
Microvirga lotononidis is a recently described species of root-nodule bacteria that is an effective nitrogen- (N(2)) fixing microsymbiont of the symbiotically specific African legume Listia angolensis (Welw. ex Bak.) B.-E. van Wyk & Boatwr. M. lotononidis possesses several properties that are un...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Michigan State University
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4149032/ https://www.ncbi.nlm.nih.gov/pubmed/25197439 http://dx.doi.org/10.4056/sigs.4548266 |
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author | Reeve, Wayne Ardley, Julie Tian, Rui De Meyer, Sofie Terpolilli, Jason Melino, Vanessa Tiwari, Ravi Yates, Ronald O’Hara, Graham Howieson, John Ninawi, Mohamed Zhang, Xiaojing Bruce, David Detter, Chris Tapia, Roxanne Han, Cliff Wei, Chia-Lin Huntemann, Marcel Han, James Chen, I-Min Mavromatis, Konstantinos Markowitz, Victor Szeto, Ernest Ivanova, Natalia Pagani, Ioanna Pati, Amrita Goodwin, Lynne Woyke, Tanja Kyrpides, Nikos |
author_facet | Reeve, Wayne Ardley, Julie Tian, Rui De Meyer, Sofie Terpolilli, Jason Melino, Vanessa Tiwari, Ravi Yates, Ronald O’Hara, Graham Howieson, John Ninawi, Mohamed Zhang, Xiaojing Bruce, David Detter, Chris Tapia, Roxanne Han, Cliff Wei, Chia-Lin Huntemann, Marcel Han, James Chen, I-Min Mavromatis, Konstantinos Markowitz, Victor Szeto, Ernest Ivanova, Natalia Pagani, Ioanna Pati, Amrita Goodwin, Lynne Woyke, Tanja Kyrpides, Nikos |
author_sort | Reeve, Wayne |
collection | PubMed |
description | Microvirga lotononidis is a recently described species of root-nodule bacteria that is an effective nitrogen- (N(2)) fixing microsymbiont of the symbiotically specific African legume Listia angolensis (Welw. ex Bak.) B.-E. van Wyk & Boatwr. M. lotononidis possesses several properties that are unusual in root-nodule bacteria, including pigmentation and the ability to grow at temperatures of up to 45°C. Strain WSM3557(T) is an aerobic, motile, Gram-negative, non-spore-forming rod isolated from a L. angolensis root nodule collected in Chipata, Zambia in 1963. This is the first report of a complete genome sequence for the genus Microvirga. Here we describe the features of Microvirga lotononidis strain WSM3557(T), together with genome sequence information and annotation. The 7,082,538 high-quality-draft genome is arranged in 18 scaffolds of 104 contigs, contains 6,956 protein-coding genes and 84 RNA-only encoding genes, and is one of 20 rhizobial genomes sequenced as part of the DOE Joint Genome Institute 2010 Community Sequencing Program. |
format | Online Article Text |
id | pubmed-4149032 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Michigan State University |
record_format | MEDLINE/PubMed |
spelling | pubmed-41490322014-09-05 Genome sequence of the Listia angolensis microsymbiont Microvirga lotononidis strain WSM3557(T) Reeve, Wayne Ardley, Julie Tian, Rui De Meyer, Sofie Terpolilli, Jason Melino, Vanessa Tiwari, Ravi Yates, Ronald O’Hara, Graham Howieson, John Ninawi, Mohamed Zhang, Xiaojing Bruce, David Detter, Chris Tapia, Roxanne Han, Cliff Wei, Chia-Lin Huntemann, Marcel Han, James Chen, I-Min Mavromatis, Konstantinos Markowitz, Victor Szeto, Ernest Ivanova, Natalia Pagani, Ioanna Pati, Amrita Goodwin, Lynne Woyke, Tanja Kyrpides, Nikos Stand Genomic Sci Short Genome Reports Microvirga lotononidis is a recently described species of root-nodule bacteria that is an effective nitrogen- (N(2)) fixing microsymbiont of the symbiotically specific African legume Listia angolensis (Welw. ex Bak.) B.-E. van Wyk & Boatwr. M. lotononidis possesses several properties that are unusual in root-nodule bacteria, including pigmentation and the ability to grow at temperatures of up to 45°C. Strain WSM3557(T) is an aerobic, motile, Gram-negative, non-spore-forming rod isolated from a L. angolensis root nodule collected in Chipata, Zambia in 1963. This is the first report of a complete genome sequence for the genus Microvirga. Here we describe the features of Microvirga lotononidis strain WSM3557(T), together with genome sequence information and annotation. The 7,082,538 high-quality-draft genome is arranged in 18 scaffolds of 104 contigs, contains 6,956 protein-coding genes and 84 RNA-only encoding genes, and is one of 20 rhizobial genomes sequenced as part of the DOE Joint Genome Institute 2010 Community Sequencing Program. Michigan State University 2013-12-31 /pmc/articles/PMC4149032/ /pubmed/25197439 http://dx.doi.org/10.4056/sigs.4548266 Text en Copyright © retained by original authors http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Short Genome Reports Reeve, Wayne Ardley, Julie Tian, Rui De Meyer, Sofie Terpolilli, Jason Melino, Vanessa Tiwari, Ravi Yates, Ronald O’Hara, Graham Howieson, John Ninawi, Mohamed Zhang, Xiaojing Bruce, David Detter, Chris Tapia, Roxanne Han, Cliff Wei, Chia-Lin Huntemann, Marcel Han, James Chen, I-Min Mavromatis, Konstantinos Markowitz, Victor Szeto, Ernest Ivanova, Natalia Pagani, Ioanna Pati, Amrita Goodwin, Lynne Woyke, Tanja Kyrpides, Nikos Genome sequence of the Listia angolensis microsymbiont Microvirga lotononidis strain WSM3557(T) |
title | Genome sequence of the Listia angolensis microsymbiont Microvirga lotononidis strain WSM3557(T) |
title_full | Genome sequence of the Listia angolensis microsymbiont Microvirga lotononidis strain WSM3557(T) |
title_fullStr | Genome sequence of the Listia angolensis microsymbiont Microvirga lotononidis strain WSM3557(T) |
title_full_unstemmed | Genome sequence of the Listia angolensis microsymbiont Microvirga lotononidis strain WSM3557(T) |
title_short | Genome sequence of the Listia angolensis microsymbiont Microvirga lotononidis strain WSM3557(T) |
title_sort | genome sequence of the listia angolensis microsymbiont microvirga lotononidis strain wsm3557(t) |
topic | Short Genome Reports |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4149032/ https://www.ncbi.nlm.nih.gov/pubmed/25197439 http://dx.doi.org/10.4056/sigs.4548266 |
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