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Genome sequence of the Listia angolensis microsymbiont Microvirga lotononidis strain WSM3557(T)

Microvirga lotononidis is a recently described species of root-nodule bacteria that is an effective nitrogen- (N(2)) fixing microsymbiont of the symbiotically specific African legume Listia angolensis (Welw. ex Bak.) B.-E. van Wyk & Boatwr. M. lotononidis possesses several properties that are un...

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Autores principales: Reeve, Wayne, Ardley, Julie, Tian, Rui, De Meyer, Sofie, Terpolilli, Jason, Melino, Vanessa, Tiwari, Ravi, Yates, Ronald, O’Hara, Graham, Howieson, John, Ninawi, Mohamed, Zhang, Xiaojing, Bruce, David, Detter, Chris, Tapia, Roxanne, Han, Cliff, Wei, Chia-Lin, Huntemann, Marcel, Han, James, Chen, I-Min, Mavromatis, Konstantinos, Markowitz, Victor, Szeto, Ernest, Ivanova, Natalia, Pagani, Ioanna, Pati, Amrita, Goodwin, Lynne, Woyke, Tanja, Kyrpides, Nikos
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Michigan State University 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4149032/
https://www.ncbi.nlm.nih.gov/pubmed/25197439
http://dx.doi.org/10.4056/sigs.4548266
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author Reeve, Wayne
Ardley, Julie
Tian, Rui
De Meyer, Sofie
Terpolilli, Jason
Melino, Vanessa
Tiwari, Ravi
Yates, Ronald
O’Hara, Graham
Howieson, John
Ninawi, Mohamed
Zhang, Xiaojing
Bruce, David
Detter, Chris
Tapia, Roxanne
Han, Cliff
Wei, Chia-Lin
Huntemann, Marcel
Han, James
Chen, I-Min
Mavromatis, Konstantinos
Markowitz, Victor
Szeto, Ernest
Ivanova, Natalia
Pagani, Ioanna
Pati, Amrita
Goodwin, Lynne
Woyke, Tanja
Kyrpides, Nikos
author_facet Reeve, Wayne
Ardley, Julie
Tian, Rui
De Meyer, Sofie
Terpolilli, Jason
Melino, Vanessa
Tiwari, Ravi
Yates, Ronald
O’Hara, Graham
Howieson, John
Ninawi, Mohamed
Zhang, Xiaojing
Bruce, David
Detter, Chris
Tapia, Roxanne
Han, Cliff
Wei, Chia-Lin
Huntemann, Marcel
Han, James
Chen, I-Min
Mavromatis, Konstantinos
Markowitz, Victor
Szeto, Ernest
Ivanova, Natalia
Pagani, Ioanna
Pati, Amrita
Goodwin, Lynne
Woyke, Tanja
Kyrpides, Nikos
author_sort Reeve, Wayne
collection PubMed
description Microvirga lotononidis is a recently described species of root-nodule bacteria that is an effective nitrogen- (N(2)) fixing microsymbiont of the symbiotically specific African legume Listia angolensis (Welw. ex Bak.) B.-E. van Wyk & Boatwr. M. lotononidis possesses several properties that are unusual in root-nodule bacteria, including pigmentation and the ability to grow at temperatures of up to 45°C. Strain WSM3557(T) is an aerobic, motile, Gram-negative, non-spore-forming rod isolated from a L. angolensis root nodule collected in Chipata, Zambia in 1963. This is the first report of a complete genome sequence for the genus Microvirga. Here we describe the features of Microvirga lotononidis strain WSM3557(T), together with genome sequence information and annotation. The 7,082,538 high-quality-draft genome is arranged in 18 scaffolds of 104 contigs, contains 6,956 protein-coding genes and 84 RNA-only encoding genes, and is one of 20 rhizobial genomes sequenced as part of the DOE Joint Genome Institute 2010 Community Sequencing Program.
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spelling pubmed-41490322014-09-05 Genome sequence of the Listia angolensis microsymbiont Microvirga lotononidis strain WSM3557(T) Reeve, Wayne Ardley, Julie Tian, Rui De Meyer, Sofie Terpolilli, Jason Melino, Vanessa Tiwari, Ravi Yates, Ronald O’Hara, Graham Howieson, John Ninawi, Mohamed Zhang, Xiaojing Bruce, David Detter, Chris Tapia, Roxanne Han, Cliff Wei, Chia-Lin Huntemann, Marcel Han, James Chen, I-Min Mavromatis, Konstantinos Markowitz, Victor Szeto, Ernest Ivanova, Natalia Pagani, Ioanna Pati, Amrita Goodwin, Lynne Woyke, Tanja Kyrpides, Nikos Stand Genomic Sci Short Genome Reports Microvirga lotononidis is a recently described species of root-nodule bacteria that is an effective nitrogen- (N(2)) fixing microsymbiont of the symbiotically specific African legume Listia angolensis (Welw. ex Bak.) B.-E. van Wyk & Boatwr. M. lotononidis possesses several properties that are unusual in root-nodule bacteria, including pigmentation and the ability to grow at temperatures of up to 45°C. Strain WSM3557(T) is an aerobic, motile, Gram-negative, non-spore-forming rod isolated from a L. angolensis root nodule collected in Chipata, Zambia in 1963. This is the first report of a complete genome sequence for the genus Microvirga. Here we describe the features of Microvirga lotononidis strain WSM3557(T), together with genome sequence information and annotation. The 7,082,538 high-quality-draft genome is arranged in 18 scaffolds of 104 contigs, contains 6,956 protein-coding genes and 84 RNA-only encoding genes, and is one of 20 rhizobial genomes sequenced as part of the DOE Joint Genome Institute 2010 Community Sequencing Program. Michigan State University 2013-12-31 /pmc/articles/PMC4149032/ /pubmed/25197439 http://dx.doi.org/10.4056/sigs.4548266 Text en Copyright © retained by original authors http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Genome Reports
Reeve, Wayne
Ardley, Julie
Tian, Rui
De Meyer, Sofie
Terpolilli, Jason
Melino, Vanessa
Tiwari, Ravi
Yates, Ronald
O’Hara, Graham
Howieson, John
Ninawi, Mohamed
Zhang, Xiaojing
Bruce, David
Detter, Chris
Tapia, Roxanne
Han, Cliff
Wei, Chia-Lin
Huntemann, Marcel
Han, James
Chen, I-Min
Mavromatis, Konstantinos
Markowitz, Victor
Szeto, Ernest
Ivanova, Natalia
Pagani, Ioanna
Pati, Amrita
Goodwin, Lynne
Woyke, Tanja
Kyrpides, Nikos
Genome sequence of the Listia angolensis microsymbiont Microvirga lotononidis strain WSM3557(T)
title Genome sequence of the Listia angolensis microsymbiont Microvirga lotononidis strain WSM3557(T)
title_full Genome sequence of the Listia angolensis microsymbiont Microvirga lotononidis strain WSM3557(T)
title_fullStr Genome sequence of the Listia angolensis microsymbiont Microvirga lotononidis strain WSM3557(T)
title_full_unstemmed Genome sequence of the Listia angolensis microsymbiont Microvirga lotononidis strain WSM3557(T)
title_short Genome sequence of the Listia angolensis microsymbiont Microvirga lotononidis strain WSM3557(T)
title_sort genome sequence of the listia angolensis microsymbiont microvirga lotononidis strain wsm3557(t)
topic Short Genome Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4149032/
https://www.ncbi.nlm.nih.gov/pubmed/25197439
http://dx.doi.org/10.4056/sigs.4548266
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