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141 Gene Discovery and Data Sharing in Genome Wide Association Analyses: lessons form AIDS genetic restriction genes
As genome wide association studies plus whole genome sequence analyses for complex human disease determinants are expanding, it seems useful to develop strategies to facilitate large data sharing, rapid replication and validation of provocative statistical associations that straddle the threshold fo...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
JAIDS Journal of Acquired Immune Deficiency Syndromes
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4149668/ http://dx.doi.org/10.1097/01.qai.0000446723.52450.65 |
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author | O'Brien, Stephen J Svitin, Anton Malov, Sergey Cherkazov, Nikolay Dobrynin, Pavel Geerts, Paul Troyer, Jennifer Hendrickson-Lambert, Sher Sezgin, Efe Hutcheson, Holli |
author_facet | O'Brien, Stephen J Svitin, Anton Malov, Sergey Cherkazov, Nikolay Dobrynin, Pavel Geerts, Paul Troyer, Jennifer Hendrickson-Lambert, Sher Sezgin, Efe Hutcheson, Holli |
author_sort | O'Brien, Stephen J |
collection | PubMed |
description | As genome wide association studies plus whole genome sequence analyses for complex human disease determinants are expanding, it seems useful to develop strategies to facilitate large data sharing, rapid replication and validation of provocative statistical associations that straddle the threshold for genome wide significance. At this conference, we shall announce GWATCH, (Genome Wide Association Tracks Chromosome Highway) a web based data release platform that can freely display and inspect unabridged genome tracked association data without compromising privacy or Informed Consent constrictions, allowing for rapid discovery and replication opportunities. We illustrate the utility with HIV-AIDS resistance genes screened in combined large multicenter cohort studies GWAS (MACS, HGDS, MHGS, ALLIVE, LSOCA HOMER) developed and studied over the last decades. |
format | Online Article Text |
id | pubmed-4149668 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | JAIDS Journal of Acquired Immune Deficiency Syndromes |
record_format | MEDLINE/PubMed |
spelling | pubmed-41496682014-09-24 141 Gene Discovery and Data Sharing in Genome Wide Association Analyses: lessons form AIDS genetic restriction genes O'Brien, Stephen J Svitin, Anton Malov, Sergey Cherkazov, Nikolay Dobrynin, Pavel Geerts, Paul Troyer, Jennifer Hendrickson-Lambert, Sher Sezgin, Efe Hutcheson, Holli J Acquir Immune Defic Syndr Abstract As genome wide association studies plus whole genome sequence analyses for complex human disease determinants are expanding, it seems useful to develop strategies to facilitate large data sharing, rapid replication and validation of provocative statistical associations that straddle the threshold for genome wide significance. At this conference, we shall announce GWATCH, (Genome Wide Association Tracks Chromosome Highway) a web based data release platform that can freely display and inspect unabridged genome tracked association data without compromising privacy or Informed Consent constrictions, allowing for rapid discovery and replication opportunities. We illustrate the utility with HIV-AIDS resistance genes screened in combined large multicenter cohort studies GWAS (MACS, HGDS, MHGS, ALLIVE, LSOCA HOMER) developed and studied over the last decades. JAIDS Journal of Acquired Immune Deficiency Syndromes 2014-04 2014-03-07 /pmc/articles/PMC4149668/ http://dx.doi.org/10.1097/01.qai.0000446723.52450.65 Text en Copyright © 2014 by Lippincott Williams & Wilkins http://creativecommons.org/licenses/by-nc-nd/3.0 This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivitives 3.0 License, where it is permissible to download and share the work provided it is properly cited. The work cannot be changed in any way or used commercially. |
spellingShingle | Abstract O'Brien, Stephen J Svitin, Anton Malov, Sergey Cherkazov, Nikolay Dobrynin, Pavel Geerts, Paul Troyer, Jennifer Hendrickson-Lambert, Sher Sezgin, Efe Hutcheson, Holli 141 Gene Discovery and Data Sharing in Genome Wide Association Analyses: lessons form AIDS genetic restriction genes |
title | 141 Gene Discovery and Data Sharing in Genome Wide Association Analyses: lessons form AIDS genetic restriction genes |
title_full | 141 Gene Discovery and Data Sharing in Genome Wide Association Analyses: lessons form AIDS genetic restriction genes |
title_fullStr | 141 Gene Discovery and Data Sharing in Genome Wide Association Analyses: lessons form AIDS genetic restriction genes |
title_full_unstemmed | 141 Gene Discovery and Data Sharing in Genome Wide Association Analyses: lessons form AIDS genetic restriction genes |
title_short | 141 Gene Discovery and Data Sharing in Genome Wide Association Analyses: lessons form AIDS genetic restriction genes |
title_sort | 141 gene discovery and data sharing in genome wide association analyses: lessons form aids genetic restriction genes |
topic | Abstract |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4149668/ http://dx.doi.org/10.1097/01.qai.0000446723.52450.65 |
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