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Testing the accuracy of an observation-based classifier for rapid detection of autism risk
Current approaches for diagnosing autism have high diagnostic validity but are time consuming and can contribute to delays in arriving at an official diagnosis. In a pilot study, we used machine learning to derive a classifier that represented a 72% reduction in length from the gold-standard Autism...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4150240/ https://www.ncbi.nlm.nih.gov/pubmed/25116834 http://dx.doi.org/10.1038/tp.2014.65 |
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author | Duda, M Kosmicki, J A Wall, D P |
author_facet | Duda, M Kosmicki, J A Wall, D P |
author_sort | Duda, M |
collection | PubMed |
description | Current approaches for diagnosing autism have high diagnostic validity but are time consuming and can contribute to delays in arriving at an official diagnosis. In a pilot study, we used machine learning to derive a classifier that represented a 72% reduction in length from the gold-standard Autism Diagnostic Observation Schedule-Generic (ADOS-G), while retaining >97% statistical accuracy. The pilot study focused on a relatively small sample of children with and without autism. The present study sought to further test the accuracy of the classifier (termed the observation-based classifier (OBC)) on an independent sample of 2616 children scored using ADOS from five data repositories and including both spectrum (n=2333) and non-spectrum (n=283) individuals. We tested OBC outcomes against the outcomes provided by the original and current ADOS algorithms, the best estimate clinical diagnosis, and the comparison score severity metric associated with ADOS-2. The OBC was significantly correlated with the ADOS-G (r=−0.814) and ADOS-2 (r=−0.779) and exhibited >97% sensitivity and >77% specificity in comparison to both ADOS algorithm scores. The correspondence to the best estimate clinical diagnosis was also high (accuracy=96.8%), with sensitivity of 97.1% and specificity of 83.3%. The correlation between the OBC score and the comparison score was significant (r=−0.628), suggesting that the OBC provides both a classification as well as a measure of severity of the phenotype. These results further demonstrate the accuracy of the OBC and suggest that reductions in the process of detecting and monitoring autism are possible. |
format | Online Article Text |
id | pubmed-4150240 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-41502402014-09-03 Testing the accuracy of an observation-based classifier for rapid detection of autism risk Duda, M Kosmicki, J A Wall, D P Transl Psychiatry Original Article Current approaches for diagnosing autism have high diagnostic validity but are time consuming and can contribute to delays in arriving at an official diagnosis. In a pilot study, we used machine learning to derive a classifier that represented a 72% reduction in length from the gold-standard Autism Diagnostic Observation Schedule-Generic (ADOS-G), while retaining >97% statistical accuracy. The pilot study focused on a relatively small sample of children with and without autism. The present study sought to further test the accuracy of the classifier (termed the observation-based classifier (OBC)) on an independent sample of 2616 children scored using ADOS from five data repositories and including both spectrum (n=2333) and non-spectrum (n=283) individuals. We tested OBC outcomes against the outcomes provided by the original and current ADOS algorithms, the best estimate clinical diagnosis, and the comparison score severity metric associated with ADOS-2. The OBC was significantly correlated with the ADOS-G (r=−0.814) and ADOS-2 (r=−0.779) and exhibited >97% sensitivity and >77% specificity in comparison to both ADOS algorithm scores. The correspondence to the best estimate clinical diagnosis was also high (accuracy=96.8%), with sensitivity of 97.1% and specificity of 83.3%. The correlation between the OBC score and the comparison score was significant (r=−0.628), suggesting that the OBC provides both a classification as well as a measure of severity of the phenotype. These results further demonstrate the accuracy of the OBC and suggest that reductions in the process of detecting and monitoring autism are possible. Nature Publishing Group 2014-08 2014-08-12 /pmc/articles/PMC4150240/ /pubmed/25116834 http://dx.doi.org/10.1038/tp.2014.65 Text en Copyright © 2014 Macmillan Publishers Limited http://creativecommons.org/licenses/by/3.0/ This work is licensed under a Creative Commons Attribution 3.0 Unported License. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/3.0/ |
spellingShingle | Original Article Duda, M Kosmicki, J A Wall, D P Testing the accuracy of an observation-based classifier for rapid detection of autism risk |
title | Testing the accuracy of an observation-based classifier for rapid detection of autism risk |
title_full | Testing the accuracy of an observation-based classifier for rapid detection of autism risk |
title_fullStr | Testing the accuracy of an observation-based classifier for rapid detection of autism risk |
title_full_unstemmed | Testing the accuracy of an observation-based classifier for rapid detection of autism risk |
title_short | Testing the accuracy of an observation-based classifier for rapid detection of autism risk |
title_sort | testing the accuracy of an observation-based classifier for rapid detection of autism risk |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4150240/ https://www.ncbi.nlm.nih.gov/pubmed/25116834 http://dx.doi.org/10.1038/tp.2014.65 |
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