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Mutant Taq DNA polymerases with improved elongation ability as a useful reagent for genetic engineering

DNA polymerases are widely used for DNA manipulation in vitro, including DNA cloning, sequencing, DNA labeling, mutagenesis, and other experiments. Thermostable DNA polymerases are especially useful and became quite valuable after the development of PCR technology. A DNA polymerase from Thermus aqua...

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Autores principales: Yamagami, Takeshi, Ishino, Sonoko, Kawarabayasi, Yutaka, Ishino, Yoshizumi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4153296/
https://www.ncbi.nlm.nih.gov/pubmed/25232352
http://dx.doi.org/10.3389/fmicb.2014.00461
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author Yamagami, Takeshi
Ishino, Sonoko
Kawarabayasi, Yutaka
Ishino, Yoshizumi
author_facet Yamagami, Takeshi
Ishino, Sonoko
Kawarabayasi, Yutaka
Ishino, Yoshizumi
author_sort Yamagami, Takeshi
collection PubMed
description DNA polymerases are widely used for DNA manipulation in vitro, including DNA cloning, sequencing, DNA labeling, mutagenesis, and other experiments. Thermostable DNA polymerases are especially useful and became quite valuable after the development of PCR technology. A DNA polymerase from Thermus aquaticus (Taq polymerase) is the most famous DNA polymerase as a PCR enzyme, and has been widely used all over the world. In this study, the gene fragments of the family A DNA polymerases were amplified by PCR from the DNAs from microorganisms within environmental soil samples, using a primer set for the two conserved regions. The corresponding region of the pol gene for Taq polymerase was substituted with the amplified gene fragments, and various chimeric DNA polymerases were prepared. Based on the properties of these chimeric enzymes and their sequences, two residues, E742 and A743, in Taq polymerase were found to be critical for its elongation ability. Taq polymerases with mutations at 742 and 743 actually showed higher DNA affinity and faster primer extension ability. These factors also affected the PCR performance of the DNA polymerase, and improved PCR results were observed with the mutant Taq polymerase.
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spelling pubmed-41532962014-09-17 Mutant Taq DNA polymerases with improved elongation ability as a useful reagent for genetic engineering Yamagami, Takeshi Ishino, Sonoko Kawarabayasi, Yutaka Ishino, Yoshizumi Front Microbiol Microbiology DNA polymerases are widely used for DNA manipulation in vitro, including DNA cloning, sequencing, DNA labeling, mutagenesis, and other experiments. Thermostable DNA polymerases are especially useful and became quite valuable after the development of PCR technology. A DNA polymerase from Thermus aquaticus (Taq polymerase) is the most famous DNA polymerase as a PCR enzyme, and has been widely used all over the world. In this study, the gene fragments of the family A DNA polymerases were amplified by PCR from the DNAs from microorganisms within environmental soil samples, using a primer set for the two conserved regions. The corresponding region of the pol gene for Taq polymerase was substituted with the amplified gene fragments, and various chimeric DNA polymerases were prepared. Based on the properties of these chimeric enzymes and their sequences, two residues, E742 and A743, in Taq polymerase were found to be critical for its elongation ability. Taq polymerases with mutations at 742 and 743 actually showed higher DNA affinity and faster primer extension ability. These factors also affected the PCR performance of the DNA polymerase, and improved PCR results were observed with the mutant Taq polymerase. Frontiers Media S.A. 2014-09-03 /pmc/articles/PMC4153296/ /pubmed/25232352 http://dx.doi.org/10.3389/fmicb.2014.00461 Text en Copyright © 2014 Yamagami, Ishino, Kawarabayasi and Ishino. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Yamagami, Takeshi
Ishino, Sonoko
Kawarabayasi, Yutaka
Ishino, Yoshizumi
Mutant Taq DNA polymerases with improved elongation ability as a useful reagent for genetic engineering
title Mutant Taq DNA polymerases with improved elongation ability as a useful reagent for genetic engineering
title_full Mutant Taq DNA polymerases with improved elongation ability as a useful reagent for genetic engineering
title_fullStr Mutant Taq DNA polymerases with improved elongation ability as a useful reagent for genetic engineering
title_full_unstemmed Mutant Taq DNA polymerases with improved elongation ability as a useful reagent for genetic engineering
title_short Mutant Taq DNA polymerases with improved elongation ability as a useful reagent for genetic engineering
title_sort mutant taq dna polymerases with improved elongation ability as a useful reagent for genetic engineering
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4153296/
https://www.ncbi.nlm.nih.gov/pubmed/25232352
http://dx.doi.org/10.3389/fmicb.2014.00461
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