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Kazusa Marker DataBase: a database for genomics, genetics, and molecular breeding in plants
In order to provide useful genomic information for agronomical plants, we have established a database, the Kazusa Marker DataBase (http://marker.kazusa.or.jp). This database includes information on DNA markers, e.g., SSR and SNP markers, genetic linkage maps, and physical maps, that were developed a...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Japanese Society of Breeding
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4154615/ https://www.ncbi.nlm.nih.gov/pubmed/25320561 http://dx.doi.org/10.1270/jsbbs.64.264 |
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author | Shirasawa, Kenta Isobe, Sachiko Tabata, Satoshi Hirakawa, Hideki |
author_facet | Shirasawa, Kenta Isobe, Sachiko Tabata, Satoshi Hirakawa, Hideki |
author_sort | Shirasawa, Kenta |
collection | PubMed |
description | In order to provide useful genomic information for agronomical plants, we have established a database, the Kazusa Marker DataBase (http://marker.kazusa.or.jp). This database includes information on DNA markers, e.g., SSR and SNP markers, genetic linkage maps, and physical maps, that were developed at the Kazusa DNA Research Institute. Keyword searches for the markers, sequence data used for marker development, and experimental conditions are also available through this database. Currently, 10 plant species have been targeted: tomato (Solanum lycopersicum), pepper (Capsicum annuum), strawberry (Fragaria × ananassa), radish (Raphanus sativus), Lotus japonicus, soybean (Glycine max), peanut (Arachis hypogaea), red clover (Trifolium pratense), white clover (Trifolium repens), and eucalyptus (Eucalyptus camaldulensis). In addition, the number of plant species registered in this database will be increased as our research progresses. The Kazusa Marker DataBase will be a useful tool for both basic and applied sciences, such as genomics, genetics, and molecular breeding in crops. |
format | Online Article Text |
id | pubmed-4154615 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Japanese Society of Breeding |
record_format | MEDLINE/PubMed |
spelling | pubmed-41546152014-10-15 Kazusa Marker DataBase: a database for genomics, genetics, and molecular breeding in plants Shirasawa, Kenta Isobe, Sachiko Tabata, Satoshi Hirakawa, Hideki Breed Sci Note In order to provide useful genomic information for agronomical plants, we have established a database, the Kazusa Marker DataBase (http://marker.kazusa.or.jp). This database includes information on DNA markers, e.g., SSR and SNP markers, genetic linkage maps, and physical maps, that were developed at the Kazusa DNA Research Institute. Keyword searches for the markers, sequence data used for marker development, and experimental conditions are also available through this database. Currently, 10 plant species have been targeted: tomato (Solanum lycopersicum), pepper (Capsicum annuum), strawberry (Fragaria × ananassa), radish (Raphanus sativus), Lotus japonicus, soybean (Glycine max), peanut (Arachis hypogaea), red clover (Trifolium pratense), white clover (Trifolium repens), and eucalyptus (Eucalyptus camaldulensis). In addition, the number of plant species registered in this database will be increased as our research progresses. The Kazusa Marker DataBase will be a useful tool for both basic and applied sciences, such as genomics, genetics, and molecular breeding in crops. Japanese Society of Breeding 2014-09 2014-09-01 /pmc/articles/PMC4154615/ /pubmed/25320561 http://dx.doi.org/10.1270/jsbbs.64.264 Text en Copyright © 2014 by JAPANESE SOCIETY OF BREEDING http://creativecommons.org/licenses/by-nc-nd/3.0 This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Note Shirasawa, Kenta Isobe, Sachiko Tabata, Satoshi Hirakawa, Hideki Kazusa Marker DataBase: a database for genomics, genetics, and molecular breeding in plants |
title | Kazusa Marker DataBase: a database for genomics, genetics, and molecular breeding in plants |
title_full | Kazusa Marker DataBase: a database for genomics, genetics, and molecular breeding in plants |
title_fullStr | Kazusa Marker DataBase: a database for genomics, genetics, and molecular breeding in plants |
title_full_unstemmed | Kazusa Marker DataBase: a database for genomics, genetics, and molecular breeding in plants |
title_short | Kazusa Marker DataBase: a database for genomics, genetics, and molecular breeding in plants |
title_sort | kazusa marker database: a database for genomics, genetics, and molecular breeding in plants |
topic | Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4154615/ https://www.ncbi.nlm.nih.gov/pubmed/25320561 http://dx.doi.org/10.1270/jsbbs.64.264 |
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