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Emergence of Assortative Mixing between Clusters of Cultured Neurons
The analysis of the activity of neuronal cultures is considered to be a good proxy of the functional connectivity of in vivo neuronal tissues. Thus, the functional complex network inferred from activity patterns is a promising way to unravel the interplay between structure and functionality of neuro...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4154651/ https://www.ncbi.nlm.nih.gov/pubmed/25188377 http://dx.doi.org/10.1371/journal.pcbi.1003796 |
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author | Teller, Sara Granell, Clara De Domenico, Manlio Soriano, Jordi Gómez, Sergio Arenas, Alex |
author_facet | Teller, Sara Granell, Clara De Domenico, Manlio Soriano, Jordi Gómez, Sergio Arenas, Alex |
author_sort | Teller, Sara |
collection | PubMed |
description | The analysis of the activity of neuronal cultures is considered to be a good proxy of the functional connectivity of in vivo neuronal tissues. Thus, the functional complex network inferred from activity patterns is a promising way to unravel the interplay between structure and functionality of neuronal systems. Here, we monitor the spontaneous self-sustained dynamics in neuronal cultures formed by interconnected aggregates of neurons (clusters). Dynamics is characterized by the fast activation of groups of clusters in sequences termed bursts. The analysis of the time delays between clusters' activations within the bursts allows the reconstruction of the directed functional connectivity of the network. We propose a method to statistically infer this connectivity and analyze the resulting properties of the associated complex networks. Surprisingly enough, in contrast to what has been reported for many biological networks, the clustered neuronal cultures present assortative mixing connectivity values, meaning that there is a preference for clusters to link to other clusters that share similar functional connectivity, as well as a rich-club core, which shapes a ‘connectivity backbone’ in the network. These results point out that the grouping of neurons and the assortative connectivity between clusters are intrinsic survival mechanisms of the culture. |
format | Online Article Text |
id | pubmed-4154651 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-41546512014-09-08 Emergence of Assortative Mixing between Clusters of Cultured Neurons Teller, Sara Granell, Clara De Domenico, Manlio Soriano, Jordi Gómez, Sergio Arenas, Alex PLoS Comput Biol Research Article The analysis of the activity of neuronal cultures is considered to be a good proxy of the functional connectivity of in vivo neuronal tissues. Thus, the functional complex network inferred from activity patterns is a promising way to unravel the interplay between structure and functionality of neuronal systems. Here, we monitor the spontaneous self-sustained dynamics in neuronal cultures formed by interconnected aggregates of neurons (clusters). Dynamics is characterized by the fast activation of groups of clusters in sequences termed bursts. The analysis of the time delays between clusters' activations within the bursts allows the reconstruction of the directed functional connectivity of the network. We propose a method to statistically infer this connectivity and analyze the resulting properties of the associated complex networks. Surprisingly enough, in contrast to what has been reported for many biological networks, the clustered neuronal cultures present assortative mixing connectivity values, meaning that there is a preference for clusters to link to other clusters that share similar functional connectivity, as well as a rich-club core, which shapes a ‘connectivity backbone’ in the network. These results point out that the grouping of neurons and the assortative connectivity between clusters are intrinsic survival mechanisms of the culture. Public Library of Science 2014-09-04 /pmc/articles/PMC4154651/ /pubmed/25188377 http://dx.doi.org/10.1371/journal.pcbi.1003796 Text en © 2014 Teller et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Teller, Sara Granell, Clara De Domenico, Manlio Soriano, Jordi Gómez, Sergio Arenas, Alex Emergence of Assortative Mixing between Clusters of Cultured Neurons |
title | Emergence of Assortative Mixing between Clusters of Cultured Neurons |
title_full | Emergence of Assortative Mixing between Clusters of Cultured Neurons |
title_fullStr | Emergence of Assortative Mixing between Clusters of Cultured Neurons |
title_full_unstemmed | Emergence of Assortative Mixing between Clusters of Cultured Neurons |
title_short | Emergence of Assortative Mixing between Clusters of Cultured Neurons |
title_sort | emergence of assortative mixing between clusters of cultured neurons |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4154651/ https://www.ncbi.nlm.nih.gov/pubmed/25188377 http://dx.doi.org/10.1371/journal.pcbi.1003796 |
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