Cargando…

Emergence of Assortative Mixing between Clusters of Cultured Neurons

The analysis of the activity of neuronal cultures is considered to be a good proxy of the functional connectivity of in vivo neuronal tissues. Thus, the functional complex network inferred from activity patterns is a promising way to unravel the interplay between structure and functionality of neuro...

Descripción completa

Detalles Bibliográficos
Autores principales: Teller, Sara, Granell, Clara, De Domenico, Manlio, Soriano, Jordi, Gómez, Sergio, Arenas, Alex
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4154651/
https://www.ncbi.nlm.nih.gov/pubmed/25188377
http://dx.doi.org/10.1371/journal.pcbi.1003796
_version_ 1782333445346689024
author Teller, Sara
Granell, Clara
De Domenico, Manlio
Soriano, Jordi
Gómez, Sergio
Arenas, Alex
author_facet Teller, Sara
Granell, Clara
De Domenico, Manlio
Soriano, Jordi
Gómez, Sergio
Arenas, Alex
author_sort Teller, Sara
collection PubMed
description The analysis of the activity of neuronal cultures is considered to be a good proxy of the functional connectivity of in vivo neuronal tissues. Thus, the functional complex network inferred from activity patterns is a promising way to unravel the interplay between structure and functionality of neuronal systems. Here, we monitor the spontaneous self-sustained dynamics in neuronal cultures formed by interconnected aggregates of neurons (clusters). Dynamics is characterized by the fast activation of groups of clusters in sequences termed bursts. The analysis of the time delays between clusters' activations within the bursts allows the reconstruction of the directed functional connectivity of the network. We propose a method to statistically infer this connectivity and analyze the resulting properties of the associated complex networks. Surprisingly enough, in contrast to what has been reported for many biological networks, the clustered neuronal cultures present assortative mixing connectivity values, meaning that there is a preference for clusters to link to other clusters that share similar functional connectivity, as well as a rich-club core, which shapes a ‘connectivity backbone’ in the network. These results point out that the grouping of neurons and the assortative connectivity between clusters are intrinsic survival mechanisms of the culture.
format Online
Article
Text
id pubmed-4154651
institution National Center for Biotechnology Information
language English
publishDate 2014
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-41546512014-09-08 Emergence of Assortative Mixing between Clusters of Cultured Neurons Teller, Sara Granell, Clara De Domenico, Manlio Soriano, Jordi Gómez, Sergio Arenas, Alex PLoS Comput Biol Research Article The analysis of the activity of neuronal cultures is considered to be a good proxy of the functional connectivity of in vivo neuronal tissues. Thus, the functional complex network inferred from activity patterns is a promising way to unravel the interplay between structure and functionality of neuronal systems. Here, we monitor the spontaneous self-sustained dynamics in neuronal cultures formed by interconnected aggregates of neurons (clusters). Dynamics is characterized by the fast activation of groups of clusters in sequences termed bursts. The analysis of the time delays between clusters' activations within the bursts allows the reconstruction of the directed functional connectivity of the network. We propose a method to statistically infer this connectivity and analyze the resulting properties of the associated complex networks. Surprisingly enough, in contrast to what has been reported for many biological networks, the clustered neuronal cultures present assortative mixing connectivity values, meaning that there is a preference for clusters to link to other clusters that share similar functional connectivity, as well as a rich-club core, which shapes a ‘connectivity backbone’ in the network. These results point out that the grouping of neurons and the assortative connectivity between clusters are intrinsic survival mechanisms of the culture. Public Library of Science 2014-09-04 /pmc/articles/PMC4154651/ /pubmed/25188377 http://dx.doi.org/10.1371/journal.pcbi.1003796 Text en © 2014 Teller et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Teller, Sara
Granell, Clara
De Domenico, Manlio
Soriano, Jordi
Gómez, Sergio
Arenas, Alex
Emergence of Assortative Mixing between Clusters of Cultured Neurons
title Emergence of Assortative Mixing between Clusters of Cultured Neurons
title_full Emergence of Assortative Mixing between Clusters of Cultured Neurons
title_fullStr Emergence of Assortative Mixing between Clusters of Cultured Neurons
title_full_unstemmed Emergence of Assortative Mixing between Clusters of Cultured Neurons
title_short Emergence of Assortative Mixing between Clusters of Cultured Neurons
title_sort emergence of assortative mixing between clusters of cultured neurons
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4154651/
https://www.ncbi.nlm.nih.gov/pubmed/25188377
http://dx.doi.org/10.1371/journal.pcbi.1003796
work_keys_str_mv AT tellersara emergenceofassortativemixingbetweenclustersofculturedneurons
AT granellclara emergenceofassortativemixingbetweenclustersofculturedneurons
AT dedomenicomanlio emergenceofassortativemixingbetweenclustersofculturedneurons
AT sorianojordi emergenceofassortativemixingbetweenclustersofculturedneurons
AT gomezsergio emergenceofassortativemixingbetweenclustersofculturedneurons
AT arenasalex emergenceofassortativemixingbetweenclustersofculturedneurons