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Stochastic Kinetics on Networks: When Slow Is Fast

[Image: see text] Most chemical and biological processes can be viewed as reaction networks in which different pathways often compete kinetically for transformation of substrates into products. An enzymatic process is an example of such phenomena when biological catalysts create new routes for chemi...

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Autores principales: Li, Xin, Kolomeisky, Anatoly B., Valleriani, Angelo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2014
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4154737/
https://www.ncbi.nlm.nih.gov/pubmed/25140607
http://dx.doi.org/10.1021/jp506668a
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author Li, Xin
Kolomeisky, Anatoly B.
Valleriani, Angelo
author_facet Li, Xin
Kolomeisky, Anatoly B.
Valleriani, Angelo
author_sort Li, Xin
collection PubMed
description [Image: see text] Most chemical and biological processes can be viewed as reaction networks in which different pathways often compete kinetically for transformation of substrates into products. An enzymatic process is an example of such phenomena when biological catalysts create new routes for chemical reactions to proceed. It is typically assumed that the general process of product formation is governed by the pathway with the fastest kinetics at all time scales. In contrast to the expectation, here we show theoretically that at time scales sufficiently short, reactions are predominantly determined by the shortest pathway (in the number of intermediate states), regardless of the average turnover time associated with each pathway. This universal phenomenon is demonstrated by an explicit calculation for a system with two competing reversible (or irreversible) pathways. The time scales that characterize this regime and its relevance for single-molecule experimental studies are also discussed.
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spelling pubmed-41547372015-08-20 Stochastic Kinetics on Networks: When Slow Is Fast Li, Xin Kolomeisky, Anatoly B. Valleriani, Angelo J Phys Chem B [Image: see text] Most chemical and biological processes can be viewed as reaction networks in which different pathways often compete kinetically for transformation of substrates into products. An enzymatic process is an example of such phenomena when biological catalysts create new routes for chemical reactions to proceed. It is typically assumed that the general process of product formation is governed by the pathway with the fastest kinetics at all time scales. In contrast to the expectation, here we show theoretically that at time scales sufficiently short, reactions are predominantly determined by the shortest pathway (in the number of intermediate states), regardless of the average turnover time associated with each pathway. This universal phenomenon is demonstrated by an explicit calculation for a system with two competing reversible (or irreversible) pathways. The time scales that characterize this regime and its relevance for single-molecule experimental studies are also discussed. American Chemical Society 2014-08-20 2014-09-04 /pmc/articles/PMC4154737/ /pubmed/25140607 http://dx.doi.org/10.1021/jp506668a Text en Copyright © 2014 American Chemical Society Terms of Use (http://pubs.acs.org/page/policy/authorchoice_termsofuse.html)
spellingShingle Li, Xin
Kolomeisky, Anatoly B.
Valleriani, Angelo
Stochastic Kinetics on Networks: When Slow Is Fast
title Stochastic Kinetics on Networks: When Slow Is Fast
title_full Stochastic Kinetics on Networks: When Slow Is Fast
title_fullStr Stochastic Kinetics on Networks: When Slow Is Fast
title_full_unstemmed Stochastic Kinetics on Networks: When Slow Is Fast
title_short Stochastic Kinetics on Networks: When Slow Is Fast
title_sort stochastic kinetics on networks: when slow is fast
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4154737/
https://www.ncbi.nlm.nih.gov/pubmed/25140607
http://dx.doi.org/10.1021/jp506668a
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