Cargando…
PatternCNV: a versatile tool for detecting copy number changes from exome sequencing data
Motivation: Exome sequencing (exome-seq) data, which are typically used for calling exonic mutations, have also been utilized in detecting DNA copy number variations (CNVs). Despite the existence of several CNV detection tools, there is still a great need for a sensitive and an accurate CNV-calling...
Autores principales: | Wang, Chen, Evans, Jared M., Bhagwate, Aditya V., Prodduturi, Naresh, Sarangi, Vivekananda, Middha, Mridu, Sicotte, Hugues, Vedell, Peter T., Hart, Steven N., Oliver, Gavin R., Kocher, Jean-Pierre A., Maurer, Matthew J., Novak, Anne J., Slager, Susan L., Cerhan, James R., Asmann, Yan W. |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2014
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4155258/ https://www.ncbi.nlm.nih.gov/pubmed/24876377 http://dx.doi.org/10.1093/bioinformatics/btu363 |
Ejemplares similares
-
RVboost: RNA-seq variants prioritization using a boosting method
por: Wang, Chen, et al.
Publicado: (2014) -
TREAT: a bioinformatics tool for variant annotations and visualizations in targeted and exome sequencing data
por: Asmann, Yan W., et al.
Publicado: (2012) -
Indel sensitive and comprehensive variant/mutation detection from RNA sequencing data for precision medicine
por: Prodduturi, Naresh, et al.
Publicado: (2018) -
Indel detection from RNA-seq data: tool evaluation and strategies for accurate detection of actionable mutations
por: Sun, Zhifu, et al.
Publicado: (2017) -
SAAP-RRBS: streamlined analysis and annotation pipeline for reduced representation bisulfite sequencing
por: Sun, Zhifu, et al.
Publicado: (2012)