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Rapid Proton-Detected NMR Assignment for Proteins with Fast Magic Angle Spinning
[Image: see text] Using a set of six (1)H-detected triple-resonance NMR experiments, we establish a method for sequence-specific backbone resonance assignment of magic angle spinning (MAS) nuclear magnetic resonance (NMR) spectra of 5–30 kDa proteins. The approach relies on perdeuteration, amide (2)...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical
Society
2014
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4156866/ https://www.ncbi.nlm.nih.gov/pubmed/25102442 http://dx.doi.org/10.1021/ja507382j |
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author | Barbet-Massin, Emeline Pell, Andrew J. Retel, Joren S. Andreas, Loren B. Jaudzems, Kristaps Franks, W. Trent Nieuwkoop, Andrew J. Hiller, Matthias Higman, Victoria Guerry, Paul Bertarello, Andrea Knight, Michael J. Felletti, Michele Le Marchand, Tanguy Kotelovica, Svetlana Akopjana, Inara Tars, Kaspars Stoppini, Monica Bellotti, Vittorio Bolognesi, Martino Ricagno, Stefano Chou, James J. Griffin, Robert G. Oschkinat, Hartmut Lesage, Anne Emsley, Lyndon Herrmann, Torsten Pintacuda, Guido |
author_facet | Barbet-Massin, Emeline Pell, Andrew J. Retel, Joren S. Andreas, Loren B. Jaudzems, Kristaps Franks, W. Trent Nieuwkoop, Andrew J. Hiller, Matthias Higman, Victoria Guerry, Paul Bertarello, Andrea Knight, Michael J. Felletti, Michele Le Marchand, Tanguy Kotelovica, Svetlana Akopjana, Inara Tars, Kaspars Stoppini, Monica Bellotti, Vittorio Bolognesi, Martino Ricagno, Stefano Chou, James J. Griffin, Robert G. Oschkinat, Hartmut Lesage, Anne Emsley, Lyndon Herrmann, Torsten Pintacuda, Guido |
author_sort | Barbet-Massin, Emeline |
collection | PubMed |
description | [Image: see text] Using a set of six (1)H-detected triple-resonance NMR experiments, we establish a method for sequence-specific backbone resonance assignment of magic angle spinning (MAS) nuclear magnetic resonance (NMR) spectra of 5–30 kDa proteins. The approach relies on perdeuteration, amide (2)H/(1)H exchange, high magnetic fields, and high-spinning frequencies (ω(r)/2π ≥ 60 kHz) and yields high-quality NMR data, enabling the use of automated analysis. The method is validated with five examples of proteins in different condensed states, including two microcrystalline proteins, a sedimented virus capsid, and two membrane-embedded systems. In comparison to contemporary (13)C/(15)N-based methods, this approach facilitates and accelerates the MAS NMR assignment process, shortening the spectral acquisition times and enabling the use of unsupervised state-of-the-art computational data analysis protocols originally developed for solution NMR. |
format | Online Article Text |
id | pubmed-4156866 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | American Chemical
Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-41568662015-08-07 Rapid Proton-Detected NMR Assignment for Proteins with Fast Magic Angle Spinning Barbet-Massin, Emeline Pell, Andrew J. Retel, Joren S. Andreas, Loren B. Jaudzems, Kristaps Franks, W. Trent Nieuwkoop, Andrew J. Hiller, Matthias Higman, Victoria Guerry, Paul Bertarello, Andrea Knight, Michael J. Felletti, Michele Le Marchand, Tanguy Kotelovica, Svetlana Akopjana, Inara Tars, Kaspars Stoppini, Monica Bellotti, Vittorio Bolognesi, Martino Ricagno, Stefano Chou, James J. Griffin, Robert G. Oschkinat, Hartmut Lesage, Anne Emsley, Lyndon Herrmann, Torsten Pintacuda, Guido J Am Chem Soc [Image: see text] Using a set of six (1)H-detected triple-resonance NMR experiments, we establish a method for sequence-specific backbone resonance assignment of magic angle spinning (MAS) nuclear magnetic resonance (NMR) spectra of 5–30 kDa proteins. The approach relies on perdeuteration, amide (2)H/(1)H exchange, high magnetic fields, and high-spinning frequencies (ω(r)/2π ≥ 60 kHz) and yields high-quality NMR data, enabling the use of automated analysis. The method is validated with five examples of proteins in different condensed states, including two microcrystalline proteins, a sedimented virus capsid, and two membrane-embedded systems. In comparison to contemporary (13)C/(15)N-based methods, this approach facilitates and accelerates the MAS NMR assignment process, shortening the spectral acquisition times and enabling the use of unsupervised state-of-the-art computational data analysis protocols originally developed for solution NMR. American Chemical Society 2014-08-07 2014-09-03 /pmc/articles/PMC4156866/ /pubmed/25102442 http://dx.doi.org/10.1021/ja507382j Text en Copyright © 2014 American Chemical Society Terms of Use (http://pubs.acs.org/page/policy/authorchoice_termsofuse.html) |
spellingShingle | Barbet-Massin, Emeline Pell, Andrew J. Retel, Joren S. Andreas, Loren B. Jaudzems, Kristaps Franks, W. Trent Nieuwkoop, Andrew J. Hiller, Matthias Higman, Victoria Guerry, Paul Bertarello, Andrea Knight, Michael J. Felletti, Michele Le Marchand, Tanguy Kotelovica, Svetlana Akopjana, Inara Tars, Kaspars Stoppini, Monica Bellotti, Vittorio Bolognesi, Martino Ricagno, Stefano Chou, James J. Griffin, Robert G. Oschkinat, Hartmut Lesage, Anne Emsley, Lyndon Herrmann, Torsten Pintacuda, Guido Rapid Proton-Detected NMR Assignment for Proteins with Fast Magic Angle Spinning |
title | Rapid Proton-Detected
NMR Assignment for Proteins
with Fast Magic Angle Spinning |
title_full | Rapid Proton-Detected
NMR Assignment for Proteins
with Fast Magic Angle Spinning |
title_fullStr | Rapid Proton-Detected
NMR Assignment for Proteins
with Fast Magic Angle Spinning |
title_full_unstemmed | Rapid Proton-Detected
NMR Assignment for Proteins
with Fast Magic Angle Spinning |
title_short | Rapid Proton-Detected
NMR Assignment for Proteins
with Fast Magic Angle Spinning |
title_sort | rapid proton-detected
nmr assignment for proteins
with fast magic angle spinning |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4156866/ https://www.ncbi.nlm.nih.gov/pubmed/25102442 http://dx.doi.org/10.1021/ja507382j |
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