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A Novel Binary T-Vector with the GFP Reporter Gene for Promoter Characterization

Several strategies have been developed to clone PCR fragments into desired vectors. However, most of commercially available T-vectors are not binary vectors and cannot be directly used for Agrobacterium-mediated plant genetic transformation. In this study, a novel binary T-vector was constructed by...

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Autores principales: Jiang, Shu-Ye, Vanitha, Jeevanandam, Bai, Yanan, Ramachandran, Srinivasan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4157869/
https://www.ncbi.nlm.nih.gov/pubmed/25197968
http://dx.doi.org/10.1371/journal.pone.0107328
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author Jiang, Shu-Ye
Vanitha, Jeevanandam
Bai, Yanan
Ramachandran, Srinivasan
author_facet Jiang, Shu-Ye
Vanitha, Jeevanandam
Bai, Yanan
Ramachandran, Srinivasan
author_sort Jiang, Shu-Ye
collection PubMed
description Several strategies have been developed to clone PCR fragments into desired vectors. However, most of commercially available T-vectors are not binary vectors and cannot be directly used for Agrobacterium-mediated plant genetic transformation. In this study, a novel binary T-vector was constructed by integrating two AhdI restriction sites into the backbone vector pCAMBIA 1300. The T-vector also contains a GFP reporter gene and thus, can be used to analyze promoter activity by monitoring the reporter gene. On the other hand, identification and characterization of various promoters not only benefit the functional annotation of their genes but also provide alternative candidates to be used to drive interesting genes for plant genetic improvement by transgenesis. More than 1,000 putative pollen-specific rice genes have been identified in a genome-wide level. Among them, 67 highly expressed genes were further characterized. One of the pollen-specific genes LOC_Os10g35930 was further surveyed in its expression patterns with more details by quantitative real-time reverse-transcription PCR (qRT-PCR) analysis. Finally, its promoter activity was further investigated by analyzing transgenic rice plants carrying the promoter::GFP cassette, which was constructed from the newly developed T-vector. The reporter GFP gene expression in these transgenic plants showed that the promoter was active only in mature but not in germinated pollens.
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spelling pubmed-41578692014-09-09 A Novel Binary T-Vector with the GFP Reporter Gene for Promoter Characterization Jiang, Shu-Ye Vanitha, Jeevanandam Bai, Yanan Ramachandran, Srinivasan PLoS One Research Article Several strategies have been developed to clone PCR fragments into desired vectors. However, most of commercially available T-vectors are not binary vectors and cannot be directly used for Agrobacterium-mediated plant genetic transformation. In this study, a novel binary T-vector was constructed by integrating two AhdI restriction sites into the backbone vector pCAMBIA 1300. The T-vector also contains a GFP reporter gene and thus, can be used to analyze promoter activity by monitoring the reporter gene. On the other hand, identification and characterization of various promoters not only benefit the functional annotation of their genes but also provide alternative candidates to be used to drive interesting genes for plant genetic improvement by transgenesis. More than 1,000 putative pollen-specific rice genes have been identified in a genome-wide level. Among them, 67 highly expressed genes were further characterized. One of the pollen-specific genes LOC_Os10g35930 was further surveyed in its expression patterns with more details by quantitative real-time reverse-transcription PCR (qRT-PCR) analysis. Finally, its promoter activity was further investigated by analyzing transgenic rice plants carrying the promoter::GFP cassette, which was constructed from the newly developed T-vector. The reporter GFP gene expression in these transgenic plants showed that the promoter was active only in mature but not in germinated pollens. Public Library of Science 2014-09-08 /pmc/articles/PMC4157869/ /pubmed/25197968 http://dx.doi.org/10.1371/journal.pone.0107328 Text en © 2014 Jiang et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Jiang, Shu-Ye
Vanitha, Jeevanandam
Bai, Yanan
Ramachandran, Srinivasan
A Novel Binary T-Vector with the GFP Reporter Gene for Promoter Characterization
title A Novel Binary T-Vector with the GFP Reporter Gene for Promoter Characterization
title_full A Novel Binary T-Vector with the GFP Reporter Gene for Promoter Characterization
title_fullStr A Novel Binary T-Vector with the GFP Reporter Gene for Promoter Characterization
title_full_unstemmed A Novel Binary T-Vector with the GFP Reporter Gene for Promoter Characterization
title_short A Novel Binary T-Vector with the GFP Reporter Gene for Promoter Characterization
title_sort novel binary t-vector with the gfp reporter gene for promoter characterization
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4157869/
https://www.ncbi.nlm.nih.gov/pubmed/25197968
http://dx.doi.org/10.1371/journal.pone.0107328
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