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A Diffusion-Tensor-Based White Matter Atlas for Rhesus Macaques

Atlases of key white matter (WM) structures in humans are widely available, and are very useful for region of interest (ROI)-based analyses of WM properties. There are histology-based atlases of cortical areas in the rhesus macaque, but none currently of specific WM structures. Since ROI-based analy...

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Autores principales: Zakszewski, Elizabeth, Adluru, Nagesh, Tromp, Do P. M., Kalin, Ned, Alexander, Andrew L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4159318/
https://www.ncbi.nlm.nih.gov/pubmed/25203614
http://dx.doi.org/10.1371/journal.pone.0107398
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author Zakszewski, Elizabeth
Adluru, Nagesh
Tromp, Do P. M.
Kalin, Ned
Alexander, Andrew L.
author_facet Zakszewski, Elizabeth
Adluru, Nagesh
Tromp, Do P. M.
Kalin, Ned
Alexander, Andrew L.
author_sort Zakszewski, Elizabeth
collection PubMed
description Atlases of key white matter (WM) structures in humans are widely available, and are very useful for region of interest (ROI)-based analyses of WM properties. There are histology-based atlases of cortical areas in the rhesus macaque, but none currently of specific WM structures. Since ROI-based analysis of WM pathways is also useful in studies using rhesus diffusion tensor imaging (DTI) data, we have here created an atlas based on a publicly available DTI-based template of young rhesus macaques. The atlas was constructed to mimic the structure of an existing human atlas that is widely used, making results translatable between species. Parcellations were carefully hand-drawn on a principle-direction color-coded fractional anisotropy image of the population template. The resulting atlas can be used as a reference to which registration of individual rhesus data can be performed for the purpose of white-matter parcellation. Alternatively, specific ROIs from the atlas may be warped into individual space to be used in ROI-based group analyses. This atlas will be made publicly available so that it may be used as a resource for DTI studies of rhesus macaques.
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spelling pubmed-41593182014-09-12 A Diffusion-Tensor-Based White Matter Atlas for Rhesus Macaques Zakszewski, Elizabeth Adluru, Nagesh Tromp, Do P. M. Kalin, Ned Alexander, Andrew L. PLoS One Research Article Atlases of key white matter (WM) structures in humans are widely available, and are very useful for region of interest (ROI)-based analyses of WM properties. There are histology-based atlases of cortical areas in the rhesus macaque, but none currently of specific WM structures. Since ROI-based analysis of WM pathways is also useful in studies using rhesus diffusion tensor imaging (DTI) data, we have here created an atlas based on a publicly available DTI-based template of young rhesus macaques. The atlas was constructed to mimic the structure of an existing human atlas that is widely used, making results translatable between species. Parcellations were carefully hand-drawn on a principle-direction color-coded fractional anisotropy image of the population template. The resulting atlas can be used as a reference to which registration of individual rhesus data can be performed for the purpose of white-matter parcellation. Alternatively, specific ROIs from the atlas may be warped into individual space to be used in ROI-based group analyses. This atlas will be made publicly available so that it may be used as a resource for DTI studies of rhesus macaques. Public Library of Science 2014-09-09 /pmc/articles/PMC4159318/ /pubmed/25203614 http://dx.doi.org/10.1371/journal.pone.0107398 Text en © 2014 Zakszewski et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Zakszewski, Elizabeth
Adluru, Nagesh
Tromp, Do P. M.
Kalin, Ned
Alexander, Andrew L.
A Diffusion-Tensor-Based White Matter Atlas for Rhesus Macaques
title A Diffusion-Tensor-Based White Matter Atlas for Rhesus Macaques
title_full A Diffusion-Tensor-Based White Matter Atlas for Rhesus Macaques
title_fullStr A Diffusion-Tensor-Based White Matter Atlas for Rhesus Macaques
title_full_unstemmed A Diffusion-Tensor-Based White Matter Atlas for Rhesus Macaques
title_short A Diffusion-Tensor-Based White Matter Atlas for Rhesus Macaques
title_sort diffusion-tensor-based white matter atlas for rhesus macaques
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4159318/
https://www.ncbi.nlm.nih.gov/pubmed/25203614
http://dx.doi.org/10.1371/journal.pone.0107398
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