Cargando…

The Application of New Molecular Methods in the Investigation of a Waterborne Outbreak of Norovirus in Denmark, 2012

In December 2012, an outbreak of acute gastrointestinal illness occurred in a geographical distinct area in Denmark covering 368 households. A combined microbiological, epidemiological and environmental investigation was initiated to understand the outbreak magnitude, pathogen(s) and vehicle in orde...

Descripción completa

Detalles Bibliográficos
Autores principales: van Alphen, Lieke B., Dorléans, Frédérique, Schultz, Anna Charlotte, Fonager, Jannik, Ethelberg, Steen, Dalgaard, Camilla, Adelhardt, Marianne, Engberg, Jørgen H., Fischer, Thea Kølsen, Lassen, Sofie Gillesberg
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4164364/
https://www.ncbi.nlm.nih.gov/pubmed/25222495
http://dx.doi.org/10.1371/journal.pone.0105053
_version_ 1782334949609701376
author van Alphen, Lieke B.
Dorléans, Frédérique
Schultz, Anna Charlotte
Fonager, Jannik
Ethelberg, Steen
Dalgaard, Camilla
Adelhardt, Marianne
Engberg, Jørgen H.
Fischer, Thea Kølsen
Lassen, Sofie Gillesberg
author_facet van Alphen, Lieke B.
Dorléans, Frédérique
Schultz, Anna Charlotte
Fonager, Jannik
Ethelberg, Steen
Dalgaard, Camilla
Adelhardt, Marianne
Engberg, Jørgen H.
Fischer, Thea Kølsen
Lassen, Sofie Gillesberg
author_sort van Alphen, Lieke B.
collection PubMed
description In December 2012, an outbreak of acute gastrointestinal illness occurred in a geographical distinct area in Denmark covering 368 households. A combined microbiological, epidemiological and environmental investigation was initiated to understand the outbreak magnitude, pathogen(s) and vehicle in order to control the outbreak. Norovirus GII.4 New Orleans 2009 variant was detected in 15 of 17 individual stool samples from 14 households. Norovirus genomic material from water samples was detected and quantified and sequencing of longer parts of the viral capsid region (>1000 nt) were applied to patient and water samples. All five purposely selected water samples tested positive for norovirus GII in levels up to 1.8×10(4) genomic units per 200 ml. Identical norovirus sequences were found in all 5 sequenced stool samples and 1 sequenced water sample, a second sequenced water sample showed 1 nt (<0.1%) difference. In a cohort study, including 256 participants, cases were defined as residents of the area experiencing diarrhoea or vomiting onset on 12–14 December 2012. We found an attack rate of 51%. Being a case was associated with drinking tap-water on 12–13 December (relative risk = 6.0, 95%CI: 1.6–22) and a dose-response relation for the mean glasses of tap-water consumed was observed. Environmental investigations suggested contamination from a sewage pipe to the drinking water due to fall in pressure during water supply system renovations. The combined microbiological, epidemiological and environmental investigations strongly indicates the outbreak was caused by norovirus contamination of the water supply system.
format Online
Article
Text
id pubmed-4164364
institution National Center for Biotechnology Information
language English
publishDate 2014
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-41643642014-09-19 The Application of New Molecular Methods in the Investigation of a Waterborne Outbreak of Norovirus in Denmark, 2012 van Alphen, Lieke B. Dorléans, Frédérique Schultz, Anna Charlotte Fonager, Jannik Ethelberg, Steen Dalgaard, Camilla Adelhardt, Marianne Engberg, Jørgen H. Fischer, Thea Kølsen Lassen, Sofie Gillesberg PLoS One Research Article In December 2012, an outbreak of acute gastrointestinal illness occurred in a geographical distinct area in Denmark covering 368 households. A combined microbiological, epidemiological and environmental investigation was initiated to understand the outbreak magnitude, pathogen(s) and vehicle in order to control the outbreak. Norovirus GII.4 New Orleans 2009 variant was detected in 15 of 17 individual stool samples from 14 households. Norovirus genomic material from water samples was detected and quantified and sequencing of longer parts of the viral capsid region (>1000 nt) were applied to patient and water samples. All five purposely selected water samples tested positive for norovirus GII in levels up to 1.8×10(4) genomic units per 200 ml. Identical norovirus sequences were found in all 5 sequenced stool samples and 1 sequenced water sample, a second sequenced water sample showed 1 nt (<0.1%) difference. In a cohort study, including 256 participants, cases were defined as residents of the area experiencing diarrhoea or vomiting onset on 12–14 December 2012. We found an attack rate of 51%. Being a case was associated with drinking tap-water on 12–13 December (relative risk = 6.0, 95%CI: 1.6–22) and a dose-response relation for the mean glasses of tap-water consumed was observed. Environmental investigations suggested contamination from a sewage pipe to the drinking water due to fall in pressure during water supply system renovations. The combined microbiological, epidemiological and environmental investigations strongly indicates the outbreak was caused by norovirus contamination of the water supply system. Public Library of Science 2014-09-15 /pmc/articles/PMC4164364/ /pubmed/25222495 http://dx.doi.org/10.1371/journal.pone.0105053 Text en © 2014 van Alphen et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
van Alphen, Lieke B.
Dorléans, Frédérique
Schultz, Anna Charlotte
Fonager, Jannik
Ethelberg, Steen
Dalgaard, Camilla
Adelhardt, Marianne
Engberg, Jørgen H.
Fischer, Thea Kølsen
Lassen, Sofie Gillesberg
The Application of New Molecular Methods in the Investigation of a Waterborne Outbreak of Norovirus in Denmark, 2012
title The Application of New Molecular Methods in the Investigation of a Waterborne Outbreak of Norovirus in Denmark, 2012
title_full The Application of New Molecular Methods in the Investigation of a Waterborne Outbreak of Norovirus in Denmark, 2012
title_fullStr The Application of New Molecular Methods in the Investigation of a Waterborne Outbreak of Norovirus in Denmark, 2012
title_full_unstemmed The Application of New Molecular Methods in the Investigation of a Waterborne Outbreak of Norovirus in Denmark, 2012
title_short The Application of New Molecular Methods in the Investigation of a Waterborne Outbreak of Norovirus in Denmark, 2012
title_sort application of new molecular methods in the investigation of a waterborne outbreak of norovirus in denmark, 2012
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4164364/
https://www.ncbi.nlm.nih.gov/pubmed/25222495
http://dx.doi.org/10.1371/journal.pone.0105053
work_keys_str_mv AT vanalphenliekeb theapplicationofnewmolecularmethodsintheinvestigationofawaterborneoutbreakofnorovirusindenmark2012
AT dorleansfrederique theapplicationofnewmolecularmethodsintheinvestigationofawaterborneoutbreakofnorovirusindenmark2012
AT schultzannacharlotte theapplicationofnewmolecularmethodsintheinvestigationofawaterborneoutbreakofnorovirusindenmark2012
AT fonagerjannik theapplicationofnewmolecularmethodsintheinvestigationofawaterborneoutbreakofnorovirusindenmark2012
AT ethelbergsteen theapplicationofnewmolecularmethodsintheinvestigationofawaterborneoutbreakofnorovirusindenmark2012
AT dalgaardcamilla theapplicationofnewmolecularmethodsintheinvestigationofawaterborneoutbreakofnorovirusindenmark2012
AT adelhardtmarianne theapplicationofnewmolecularmethodsintheinvestigationofawaterborneoutbreakofnorovirusindenmark2012
AT engbergjørgenh theapplicationofnewmolecularmethodsintheinvestigationofawaterborneoutbreakofnorovirusindenmark2012
AT fischertheakølsen theapplicationofnewmolecularmethodsintheinvestigationofawaterborneoutbreakofnorovirusindenmark2012
AT lassensofiegillesberg theapplicationofnewmolecularmethodsintheinvestigationofawaterborneoutbreakofnorovirusindenmark2012
AT vanalphenliekeb applicationofnewmolecularmethodsintheinvestigationofawaterborneoutbreakofnorovirusindenmark2012
AT dorleansfrederique applicationofnewmolecularmethodsintheinvestigationofawaterborneoutbreakofnorovirusindenmark2012
AT schultzannacharlotte applicationofnewmolecularmethodsintheinvestigationofawaterborneoutbreakofnorovirusindenmark2012
AT fonagerjannik applicationofnewmolecularmethodsintheinvestigationofawaterborneoutbreakofnorovirusindenmark2012
AT ethelbergsteen applicationofnewmolecularmethodsintheinvestigationofawaterborneoutbreakofnorovirusindenmark2012
AT dalgaardcamilla applicationofnewmolecularmethodsintheinvestigationofawaterborneoutbreakofnorovirusindenmark2012
AT adelhardtmarianne applicationofnewmolecularmethodsintheinvestigationofawaterborneoutbreakofnorovirusindenmark2012
AT engbergjørgenh applicationofnewmolecularmethodsintheinvestigationofawaterborneoutbreakofnorovirusindenmark2012
AT fischertheakølsen applicationofnewmolecularmethodsintheinvestigationofawaterborneoutbreakofnorovirusindenmark2012
AT lassensofiegillesberg applicationofnewmolecularmethodsintheinvestigationofawaterborneoutbreakofnorovirusindenmark2012