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The Application of New Molecular Methods in the Investigation of a Waterborne Outbreak of Norovirus in Denmark, 2012
In December 2012, an outbreak of acute gastrointestinal illness occurred in a geographical distinct area in Denmark covering 368 households. A combined microbiological, epidemiological and environmental investigation was initiated to understand the outbreak magnitude, pathogen(s) and vehicle in orde...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4164364/ https://www.ncbi.nlm.nih.gov/pubmed/25222495 http://dx.doi.org/10.1371/journal.pone.0105053 |
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author | van Alphen, Lieke B. Dorléans, Frédérique Schultz, Anna Charlotte Fonager, Jannik Ethelberg, Steen Dalgaard, Camilla Adelhardt, Marianne Engberg, Jørgen H. Fischer, Thea Kølsen Lassen, Sofie Gillesberg |
author_facet | van Alphen, Lieke B. Dorléans, Frédérique Schultz, Anna Charlotte Fonager, Jannik Ethelberg, Steen Dalgaard, Camilla Adelhardt, Marianne Engberg, Jørgen H. Fischer, Thea Kølsen Lassen, Sofie Gillesberg |
author_sort | van Alphen, Lieke B. |
collection | PubMed |
description | In December 2012, an outbreak of acute gastrointestinal illness occurred in a geographical distinct area in Denmark covering 368 households. A combined microbiological, epidemiological and environmental investigation was initiated to understand the outbreak magnitude, pathogen(s) and vehicle in order to control the outbreak. Norovirus GII.4 New Orleans 2009 variant was detected in 15 of 17 individual stool samples from 14 households. Norovirus genomic material from water samples was detected and quantified and sequencing of longer parts of the viral capsid region (>1000 nt) were applied to patient and water samples. All five purposely selected water samples tested positive for norovirus GII in levels up to 1.8×10(4) genomic units per 200 ml. Identical norovirus sequences were found in all 5 sequenced stool samples and 1 sequenced water sample, a second sequenced water sample showed 1 nt (<0.1%) difference. In a cohort study, including 256 participants, cases were defined as residents of the area experiencing diarrhoea or vomiting onset on 12–14 December 2012. We found an attack rate of 51%. Being a case was associated with drinking tap-water on 12–13 December (relative risk = 6.0, 95%CI: 1.6–22) and a dose-response relation for the mean glasses of tap-water consumed was observed. Environmental investigations suggested contamination from a sewage pipe to the drinking water due to fall in pressure during water supply system renovations. The combined microbiological, epidemiological and environmental investigations strongly indicates the outbreak was caused by norovirus contamination of the water supply system. |
format | Online Article Text |
id | pubmed-4164364 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-41643642014-09-19 The Application of New Molecular Methods in the Investigation of a Waterborne Outbreak of Norovirus in Denmark, 2012 van Alphen, Lieke B. Dorléans, Frédérique Schultz, Anna Charlotte Fonager, Jannik Ethelberg, Steen Dalgaard, Camilla Adelhardt, Marianne Engberg, Jørgen H. Fischer, Thea Kølsen Lassen, Sofie Gillesberg PLoS One Research Article In December 2012, an outbreak of acute gastrointestinal illness occurred in a geographical distinct area in Denmark covering 368 households. A combined microbiological, epidemiological and environmental investigation was initiated to understand the outbreak magnitude, pathogen(s) and vehicle in order to control the outbreak. Norovirus GII.4 New Orleans 2009 variant was detected in 15 of 17 individual stool samples from 14 households. Norovirus genomic material from water samples was detected and quantified and sequencing of longer parts of the viral capsid region (>1000 nt) were applied to patient and water samples. All five purposely selected water samples tested positive for norovirus GII in levels up to 1.8×10(4) genomic units per 200 ml. Identical norovirus sequences were found in all 5 sequenced stool samples and 1 sequenced water sample, a second sequenced water sample showed 1 nt (<0.1%) difference. In a cohort study, including 256 participants, cases were defined as residents of the area experiencing diarrhoea or vomiting onset on 12–14 December 2012. We found an attack rate of 51%. Being a case was associated with drinking tap-water on 12–13 December (relative risk = 6.0, 95%CI: 1.6–22) and a dose-response relation for the mean glasses of tap-water consumed was observed. Environmental investigations suggested contamination from a sewage pipe to the drinking water due to fall in pressure during water supply system renovations. The combined microbiological, epidemiological and environmental investigations strongly indicates the outbreak was caused by norovirus contamination of the water supply system. Public Library of Science 2014-09-15 /pmc/articles/PMC4164364/ /pubmed/25222495 http://dx.doi.org/10.1371/journal.pone.0105053 Text en © 2014 van Alphen et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article van Alphen, Lieke B. Dorléans, Frédérique Schultz, Anna Charlotte Fonager, Jannik Ethelberg, Steen Dalgaard, Camilla Adelhardt, Marianne Engberg, Jørgen H. Fischer, Thea Kølsen Lassen, Sofie Gillesberg The Application of New Molecular Methods in the Investigation of a Waterborne Outbreak of Norovirus in Denmark, 2012 |
title | The Application of New Molecular Methods in the Investigation of a Waterborne Outbreak of Norovirus in Denmark, 2012 |
title_full | The Application of New Molecular Methods in the Investigation of a Waterborne Outbreak of Norovirus in Denmark, 2012 |
title_fullStr | The Application of New Molecular Methods in the Investigation of a Waterborne Outbreak of Norovirus in Denmark, 2012 |
title_full_unstemmed | The Application of New Molecular Methods in the Investigation of a Waterborne Outbreak of Norovirus in Denmark, 2012 |
title_short | The Application of New Molecular Methods in the Investigation of a Waterborne Outbreak of Norovirus in Denmark, 2012 |
title_sort | application of new molecular methods in the investigation of a waterborne outbreak of norovirus in denmark, 2012 |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4164364/ https://www.ncbi.nlm.nih.gov/pubmed/25222495 http://dx.doi.org/10.1371/journal.pone.0105053 |
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