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Polymer models of interphase chromosomes

Clear organizational patterns on the genome have emerged from the statistics of population studies of fixed cells. However, how these results translate into the dynamics of individual living cells remains unexplored. We use statistical mechanics models derived from polymer physics to inquire into th...

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Detalles Bibliográficos
Autores principales: Vasquez, Paula A, Bloom, Kerry
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Landes Bioscience 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4164481/
https://www.ncbi.nlm.nih.gov/pubmed/25482191
http://dx.doi.org/10.4161/nucl.36275
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author Vasquez, Paula A
Bloom, Kerry
author_facet Vasquez, Paula A
Bloom, Kerry
author_sort Vasquez, Paula A
collection PubMed
description Clear organizational patterns on the genome have emerged from the statistics of population studies of fixed cells. However, how these results translate into the dynamics of individual living cells remains unexplored. We use statistical mechanics models derived from polymer physics to inquire into the effects that chromosome properties and dynamics have in the temporal and spatial behavior of the genome. Overall, changes in the properties of individual chains affect the behavior of all other chains in the domain. We explore two modifications of chain behavior: single chain motion and chain-chain interactions. We show that there is not a direct relation between these effects, as increase in motion, doesn’t necessarily translate into an increase on chain interaction.
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spelling pubmed-41644812015-09-01 Polymer models of interphase chromosomes Vasquez, Paula A Bloom, Kerry Nucleus Extra View Clear organizational patterns on the genome have emerged from the statistics of population studies of fixed cells. However, how these results translate into the dynamics of individual living cells remains unexplored. We use statistical mechanics models derived from polymer physics to inquire into the effects that chromosome properties and dynamics have in the temporal and spatial behavior of the genome. Overall, changes in the properties of individual chains affect the behavior of all other chains in the domain. We explore two modifications of chain behavior: single chain motion and chain-chain interactions. We show that there is not a direct relation between these effects, as increase in motion, doesn’t necessarily translate into an increase on chain interaction. Landes Bioscience 2014-09-01 2014-09-02 /pmc/articles/PMC4164481/ /pubmed/25482191 http://dx.doi.org/10.4161/nucl.36275 Text en Copyright © 2014 Landes Bioscience http://creativecommons.org/licenses/by-nc/3.0/ This is an open-access article licensed under a Creative Commons Attribution-NonCommercial 3.0 Unported License. The article may be redistributed, reproduced, and reused for non-commercial purposes, provided the original source is properly cited.
spellingShingle Extra View
Vasquez, Paula A
Bloom, Kerry
Polymer models of interphase chromosomes
title Polymer models of interphase chromosomes
title_full Polymer models of interphase chromosomes
title_fullStr Polymer models of interphase chromosomes
title_full_unstemmed Polymer models of interphase chromosomes
title_short Polymer models of interphase chromosomes
title_sort polymer models of interphase chromosomes
topic Extra View
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4164481/
https://www.ncbi.nlm.nih.gov/pubmed/25482191
http://dx.doi.org/10.4161/nucl.36275
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