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ELXR: a resource for rapid exon-directed sequence analysis

ELXR (Exon Locator and Extractor for Resequencing) streamlines the process of determining exon/intron boundaries and designing PCR and sequencing primers for high-throughput resequencing of exons. We have pre-computed ELXR primer sets for all exons identified from the human, mouse, and rat mRNA refe...

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Autores principales: Schageman, Jeoffrey J, Horton, Christopher J, Niu, Sijing, Garner, Harold R, Pertsemlidis, Alexander
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2004
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC416472/
https://www.ncbi.nlm.nih.gov/pubmed/15128450
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author Schageman, Jeoffrey J
Horton, Christopher J
Niu, Sijing
Garner, Harold R
Pertsemlidis, Alexander
author_facet Schageman, Jeoffrey J
Horton, Christopher J
Niu, Sijing
Garner, Harold R
Pertsemlidis, Alexander
author_sort Schageman, Jeoffrey J
collection PubMed
description ELXR (Exon Locator and Extractor for Resequencing) streamlines the process of determining exon/intron boundaries and designing PCR and sequencing primers for high-throughput resequencing of exons. We have pre-computed ELXR primer sets for all exons identified from the human, mouse, and rat mRNA reference sequence (RefSeq) public databases curated by the National Center for Biotechnology Information. The resulting exon-flanking PCR primer pairs have been compiled into a system called ELXRdb, which may be searched by keyword, gene name or RefSeq accession number.
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spelling pubmed-4164722004-05-22 ELXR: a resource for rapid exon-directed sequence analysis Schageman, Jeoffrey J Horton, Christopher J Niu, Sijing Garner, Harold R Pertsemlidis, Alexander Genome Biol Software ELXR (Exon Locator and Extractor for Resequencing) streamlines the process of determining exon/intron boundaries and designing PCR and sequencing primers for high-throughput resequencing of exons. We have pre-computed ELXR primer sets for all exons identified from the human, mouse, and rat mRNA reference sequence (RefSeq) public databases curated by the National Center for Biotechnology Information. The resulting exon-flanking PCR primer pairs have been compiled into a system called ELXRdb, which may be searched by keyword, gene name or RefSeq accession number. BioMed Central 2004 2004-04-28 /pmc/articles/PMC416472/ /pubmed/15128450 Text en Copyright © 2004 Schageman et al.; licensee BioMed Central Ltd. This is an Open Access article: verbatim copying and redistribution of this article are permitted in all media for any purpose, provided this notice is preserved along with the article's original URL.
spellingShingle Software
Schageman, Jeoffrey J
Horton, Christopher J
Niu, Sijing
Garner, Harold R
Pertsemlidis, Alexander
ELXR: a resource for rapid exon-directed sequence analysis
title ELXR: a resource for rapid exon-directed sequence analysis
title_full ELXR: a resource for rapid exon-directed sequence analysis
title_fullStr ELXR: a resource for rapid exon-directed sequence analysis
title_full_unstemmed ELXR: a resource for rapid exon-directed sequence analysis
title_short ELXR: a resource for rapid exon-directed sequence analysis
title_sort elxr: a resource for rapid exon-directed sequence analysis
topic Software
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC416472/
https://www.ncbi.nlm.nih.gov/pubmed/15128450
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