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Analytical approximations of the firing rate of an adaptive exponential integrate-and-fire neuron in the presence of synaptic noise
Computational models offer a unique tool for understanding the network-dynamical mechanisms which mediate between physiological and biophysical properties, and behavioral function. A traditional challenge in computational neuroscience is, however, that simple neuronal models which can be studied ana...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4167001/ https://www.ncbi.nlm.nih.gov/pubmed/25278872 http://dx.doi.org/10.3389/fncom.2014.00116 |
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author | Hertäg, Loreen Durstewitz, Daniel Brunel, Nicolas |
author_facet | Hertäg, Loreen Durstewitz, Daniel Brunel, Nicolas |
author_sort | Hertäg, Loreen |
collection | PubMed |
description | Computational models offer a unique tool for understanding the network-dynamical mechanisms which mediate between physiological and biophysical properties, and behavioral function. A traditional challenge in computational neuroscience is, however, that simple neuronal models which can be studied analytically fail to reproduce the diversity of electrophysiological behaviors seen in real neurons, while detailed neuronal models which do reproduce such diversity are intractable analytically and computationally expensive. A number of intermediate models have been proposed whose aim is to capture the diversity of firing behaviors and spike times of real neurons while entailing the simplest possible mathematical description. One such model is the exponential integrate-and-fire neuron with spike rate adaptation (aEIF) which consists of two differential equations for the membrane potential (V) and an adaptation current (w). Despite its simplicity, it can reproduce a wide variety of physiologically observed spiking patterns, can be fit to physiological recordings quantitatively, and, once done so, is able to predict spike times on traces not used for model fitting. Here we compute the steady-state firing rate of aEIF in the presence of Gaussian synaptic noise, using two approaches. The first approach is based on the 2-dimensional Fokker-Planck equation that describes the (V,w)-probability distribution, which is solved using an expansion in the ratio between the time constants of the two variables. The second is based on the firing rate of the EIF model, which is averaged over the distribution of the w variable. These analytically derived closed-form expressions were tested on simulations from a large variety of model cells quantitatively fitted to in vitro electrophysiological recordings from pyramidal cells and interneurons. Theoretical predictions closely agreed with the firing rate of the simulated cells fed with in-vivo-like synaptic noise. |
format | Online Article Text |
id | pubmed-4167001 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-41670012014-10-02 Analytical approximations of the firing rate of an adaptive exponential integrate-and-fire neuron in the presence of synaptic noise Hertäg, Loreen Durstewitz, Daniel Brunel, Nicolas Front Comput Neurosci Neuroscience Computational models offer a unique tool for understanding the network-dynamical mechanisms which mediate between physiological and biophysical properties, and behavioral function. A traditional challenge in computational neuroscience is, however, that simple neuronal models which can be studied analytically fail to reproduce the diversity of electrophysiological behaviors seen in real neurons, while detailed neuronal models which do reproduce such diversity are intractable analytically and computationally expensive. A number of intermediate models have been proposed whose aim is to capture the diversity of firing behaviors and spike times of real neurons while entailing the simplest possible mathematical description. One such model is the exponential integrate-and-fire neuron with spike rate adaptation (aEIF) which consists of two differential equations for the membrane potential (V) and an adaptation current (w). Despite its simplicity, it can reproduce a wide variety of physiologically observed spiking patterns, can be fit to physiological recordings quantitatively, and, once done so, is able to predict spike times on traces not used for model fitting. Here we compute the steady-state firing rate of aEIF in the presence of Gaussian synaptic noise, using two approaches. The first approach is based on the 2-dimensional Fokker-Planck equation that describes the (V,w)-probability distribution, which is solved using an expansion in the ratio between the time constants of the two variables. The second is based on the firing rate of the EIF model, which is averaged over the distribution of the w variable. These analytically derived closed-form expressions were tested on simulations from a large variety of model cells quantitatively fitted to in vitro electrophysiological recordings from pyramidal cells and interneurons. Theoretical predictions closely agreed with the firing rate of the simulated cells fed with in-vivo-like synaptic noise. Frontiers Media S.A. 2014-09-18 /pmc/articles/PMC4167001/ /pubmed/25278872 http://dx.doi.org/10.3389/fncom.2014.00116 Text en Copyright © 2014 Hertäg, Durstewitz and Brunel. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Hertäg, Loreen Durstewitz, Daniel Brunel, Nicolas Analytical approximations of the firing rate of an adaptive exponential integrate-and-fire neuron in the presence of synaptic noise |
title | Analytical approximations of the firing rate of an adaptive exponential integrate-and-fire neuron in the presence of synaptic noise |
title_full | Analytical approximations of the firing rate of an adaptive exponential integrate-and-fire neuron in the presence of synaptic noise |
title_fullStr | Analytical approximations of the firing rate of an adaptive exponential integrate-and-fire neuron in the presence of synaptic noise |
title_full_unstemmed | Analytical approximations of the firing rate of an adaptive exponential integrate-and-fire neuron in the presence of synaptic noise |
title_short | Analytical approximations of the firing rate of an adaptive exponential integrate-and-fire neuron in the presence of synaptic noise |
title_sort | analytical approximations of the firing rate of an adaptive exponential integrate-and-fire neuron in the presence of synaptic noise |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4167001/ https://www.ncbi.nlm.nih.gov/pubmed/25278872 http://dx.doi.org/10.3389/fncom.2014.00116 |
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