Cargando…

Automated quantification of aligned collagen for human breast carcinoma prognosis

BACKGROUND: Mortality in cancer patients is directly attributable to the ability of cancer cells to metastasize to distant sites from the primary tumor. This migration of tumor cells begins with a remodeling of the local tumor microenvironment, including changes to the extracellular matrix and the r...

Descripción completa

Detalles Bibliográficos
Autores principales:	Bredfeldt, Jeremy S., Liu, Yuming, Conklin, Matthew W., Keely, Patricia J., Mackie, Thomas R., Eliceiri, Kevin W.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Medknow Publications & Media Pvt Ltd 2014
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4168643/ https://www.ncbi.nlm.nih.gov/pubmed/25250186 http://dx.doi.org/10.4103/2153-3539.139707

Ejemplares similares

Fibrillar Collagen Quantification With Curvelet Transform Based Computational Methods
por: Liu, Yuming, et al.
Publicado: (2020)

Targeted matrisome analysis identifies thrombospondin-2 and tenascin-C in aligned collagen stroma from invasive breast carcinoma
por: Tomko, Lucas A., et al.
Publicado: (2018)

Collagen organization of renal cell carcinoma differs between low and high grade tumors
por: Best, Sara L., et al.
Publicado: (2019)

Non-disruptive collagen characterization in clinical histopathology using cross-modality image synthesis
por: Keikhosravi, Adib, et al.
Publicado: (2020)

Real-time polarization microscopy of fibrillar collagen in histopathology
por: Keikhosravi, Adib, et al.
Publicado: (2021)

Dense Collagen-I Matrices Enhance Pro-Tumorigenic Estrogen-Prolactin Crosstalk in MCF-7 and T47D Breast Cancer Cells
por: Barcus, Craig E., et al.
Publicado: (2015)

Quantification of Collagen Organization after Nerve Repair
por: Israel, Jacqueline S., et al.
Publicado: (2017)

Structural changes in mixed Col I/Col V collagen gels probed by SHG microscopy: implications for probing stromal alterations in human breast cancer
por: Ajeti, Visar, et al.
Publicado: (2011)

Highly aligned stromal collagen is a negative prognostic factor following pancreatic ductal adenocarcinoma resection
por: Drifka, Cole R., et al.
Publicado: (2016)

Why the stroma matters in breast cancer: Insights into breast cancer patient outcomes through the examination of stromal biomarkers
por: Conklin, Matthew W., et al.
Publicado: (2012)

Collagen reorganization at the tumor-stromal interface facilitates local invasion
por: Provenzano, Paolo P, et al.
Publicado: (2006)

A Three-Dimensional Computational Model of Collagen Network Mechanics
por: Lee, Byoungkoo, et al.
Publicado: (2014)

Collagen density promotes mammary tumor initiation and progression
por: Provenzano, Paolo P, et al.
Publicado: (2008)

Mammary collagen architecture and its association with mammographic density and lesion severity among women undergoing image-guided breast biopsy
por: Bodelon, Clara, et al.
Publicado: (2021)

Prolactin signaling through focal adhesion complexes is amplified by stiff extracellular matrices in breast cancer cells
por: Barcus, Craig E., et al.
Publicado: (2016)

Matrix density-induced mechanoregulation of breast cell phenotype, signaling, and gene expression through a FAK-ERK linkage
por: Provenzano, Paolo P., et al.
Publicado: (2009)

Elevated collagen-I augments tumor progressive signals, intravasation and metastasis of prolactin-induced estrogen receptor alpha positive mammary tumor cells
por: Barcus, Craig E., et al.
Publicado: (2017)

TRIC: an automated alignment strategy for reproducible protein quantification in targeted proteomics
por: Röst, Hannes L., et al.
Publicado: (2016)

Navigating the Collagen Jungle: The Biomedical Potential of Fiber Organization in Cancer
por: Ouellette, Jonathan N., et al.
Publicado: (2021)

Computer-assisted quantification of tumor-associated collagen signatures to improve the prognosis prediction of breast cancer
por: Xi, Gangqin, et al.
Publicado: (2021)

Use of three-dimensional collagen gels to study mechanotransduction in T47D breast epithelial cells
por: Wozniak, Michele A., et al.
Publicado: (2005)

Rapid Quantification of 3D Collagen Fiber Alignment and Fiber Intersection Correlations with High Sensitivity
por: Sun, Meng, et al.
Publicado: (2015)

Quantification of Interfibrillar Shear Stress in Aligned Soft Collagenous Tissues via Notch Tension Testing
por: Szczesny, Spencer E., et al.
Publicado: (2015)

Lactation opposes pappalysin‐1‐driven pregnancy‐associated breast cancer
por: Takabatake, Yukie, et al.
Publicado: (2016)

c-Met overexpression in inflammatory breast carcinomas: automated quantification on tissue microarrays
por: Garcia, S, et al.
Publicado: (2007)

An In Vitro Model for Assessing Corneal Keratocyte Spreading and Migration on Aligned Fibrillar Collagen
por: Kivanany, Pouriska B., et al.
Publicado: (2018)

Correction: Rapid Quantification of 3D Collagen Fiber Alignment and Fiber Intersection Correlations with High Sensitivity
por: Sun, Meng, et al.
Publicado: (2016)

RhoA is down-regulated at cell–cell contacts via p190RhoGAP-B in response to tensional homeostasis
por: Ponik, Suzanne M., et al.
Publicado: (2013)

Quantifying Breast Cancer-Driven Fiber Alignment and Collagen Deposition in Primary Human Breast Tissue
por: Gurrala, Rakesh, et al.
Publicado: (2021)

A Semi-Automated Workflow for Brain Slice Histology Alignment, Registration, and Cell Quantification (SHARCQ)
por: Lauridsen, Kristoffer, et al.
Publicado: (2022)

Aligning the Aligners: Comparison of RNA Sequencing Data Alignment and Gene Expression Quantification Tools for Clinical Breast Cancer Research
por: Raplee, Isaac D., et al.
Publicado: (2019)

Calcific Aortic Valve Disease Is Associated with Layer-Specific Alterations in Collagen Architecture
por: Hutson, Heather N., et al.
Publicado: (2016)

Differentiation of pancreatic ductal adenocarcinoma and chronic pancreatitis using graph neural networks on histopathology and collagen fiber features
por: Li, Bin, et al.
Publicado: (2022)

Strain-Induced Alignment in Collagen Gels
por: Vader, David, et al.
Publicado: (2009)

Managing protected health information in distributed research network environments: automated review to facilitate collaboration
por: Bredfeldt, Christine E, et al.
Publicado: (2013)

R-Ras regulates β(1)-integrin trafficking via effects on membrane ruffling and endocytosis
por: Conklin, Matthew W, et al.
Publicado: (2010)

Collagen Matrix Density Drives the Metabolic Shift in Breast Cancer Cells
por: Morris, Brett A., et al.
Publicado: (2016)

ROCK-generated contractility regulates breast epithelial cell differentiation in response to the physical properties of a three-dimensional collagen matrix
por: Wozniak, Michele A., et al.
Publicado: (2003)

Spatial collagen stiffening promotes collective breast cancer cell invasion by reinforcing extracellular matrix alignment
por: Koorman, Thijs, et al.
Publicado: (2022)

Chain Alignment of Collagen I Deciphered using Computationally Designed Heterotrimers
por: Jalan, Abhishek A., et al.
Publicado: (2020)

Cannot write session to /tmp/vufind_sessions/sess_omn2ou7opisd3ggsbjru04b92k