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DNAH5 is associated with total lung capacity in chronic obstructive pulmonary disease
BACKGROUND: Chronic obstructive pulmonary disease (COPD) is characterized by expiratory flow limitation, causing air trapping and lung hyperinflation. Hyperinflation leads to reduced exercise tolerance and poor quality of life in COPD patients. Total lung capacity (TLC) is an indicator of hyperinfla...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4169636/ https://www.ncbi.nlm.nih.gov/pubmed/25134640 http://dx.doi.org/10.1186/s12931-014-0097-y |
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author | Lee, Jin Hwa McDonald, Merry-Lynn N Cho, Michael H Wan, Emily S Castaldi, Peter J Hunninghake, Gary M Marchetti, Nathaniel Lynch, David A Crapo, James D Lomas, David A Coxson, Harvey O Bakke, Per S Silverman, Edwin K Hersh, Craig P |
author_facet | Lee, Jin Hwa McDonald, Merry-Lynn N Cho, Michael H Wan, Emily S Castaldi, Peter J Hunninghake, Gary M Marchetti, Nathaniel Lynch, David A Crapo, James D Lomas, David A Coxson, Harvey O Bakke, Per S Silverman, Edwin K Hersh, Craig P |
author_sort | Lee, Jin Hwa |
collection | PubMed |
description | BACKGROUND: Chronic obstructive pulmonary disease (COPD) is characterized by expiratory flow limitation, causing air trapping and lung hyperinflation. Hyperinflation leads to reduced exercise tolerance and poor quality of life in COPD patients. Total lung capacity (TLC) is an indicator of hyperinflation particularly in subjects with moderate-to-severe airflow obstruction. The aim of our study was to identify genetic variants associated with TLC in COPD. METHODS: We performed genome-wide association studies (GWASs) in white subjects from three cohorts: the COPDGene Study; the Evaluation of COPD Longitudinally to Identify Predictive Surrogate Endpoints (ECLIPSE); and GenKOLS (Bergen, Norway). All subjects were current or ex-smokers with at least moderate airflow obstruction, defined by a ratio of forced expiratory volume in 1 second to forced vital capacity (FEV(1)/FVC) <0.7 and FEV(1) < 80% predicted on post-bronchodilator spirometry. TLC was calculated by using volumetric computed tomography scans at full inspiration (TLC(CT)). Genotyping in each cohort was completed, with statistical imputation of additional markers. To find genetic variants associated with TLC(CT), linear regression models were used, with adjustment for age, sex, pack-years of smoking, height, and principal components for genetic ancestry. Results were summarized using fixed-effect meta-analysis. RESULTS: Analysis of a total of 4,543 COPD subjects identified one genome-wide significant locus on chromosome 5p15.2 (rs114929486, β = 0.42L, P = 4.66 × 10(−8)). CONCLUSIONS: In COPD, TLC(CT) was associated with a SNP in dynein, axonemal, heavy chain 5 (DNAH5), a gene in which genetic variants can cause primary ciliary dyskinesia. DNAH5 could have an effect on hyperinflation in COPD. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12931-014-0097-y) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-4169636 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-41696362014-09-21 DNAH5 is associated with total lung capacity in chronic obstructive pulmonary disease Lee, Jin Hwa McDonald, Merry-Lynn N Cho, Michael H Wan, Emily S Castaldi, Peter J Hunninghake, Gary M Marchetti, Nathaniel Lynch, David A Crapo, James D Lomas, David A Coxson, Harvey O Bakke, Per S Silverman, Edwin K Hersh, Craig P Respir Res Research BACKGROUND: Chronic obstructive pulmonary disease (COPD) is characterized by expiratory flow limitation, causing air trapping and lung hyperinflation. Hyperinflation leads to reduced exercise tolerance and poor quality of life in COPD patients. Total lung capacity (TLC) is an indicator of hyperinflation particularly in subjects with moderate-to-severe airflow obstruction. The aim of our study was to identify genetic variants associated with TLC in COPD. METHODS: We performed genome-wide association studies (GWASs) in white subjects from three cohorts: the COPDGene Study; the Evaluation of COPD Longitudinally to Identify Predictive Surrogate Endpoints (ECLIPSE); and GenKOLS (Bergen, Norway). All subjects were current or ex-smokers with at least moderate airflow obstruction, defined by a ratio of forced expiratory volume in 1 second to forced vital capacity (FEV(1)/FVC) <0.7 and FEV(1) < 80% predicted on post-bronchodilator spirometry. TLC was calculated by using volumetric computed tomography scans at full inspiration (TLC(CT)). Genotyping in each cohort was completed, with statistical imputation of additional markers. To find genetic variants associated with TLC(CT), linear regression models were used, with adjustment for age, sex, pack-years of smoking, height, and principal components for genetic ancestry. Results were summarized using fixed-effect meta-analysis. RESULTS: Analysis of a total of 4,543 COPD subjects identified one genome-wide significant locus on chromosome 5p15.2 (rs114929486, β = 0.42L, P = 4.66 × 10(−8)). CONCLUSIONS: In COPD, TLC(CT) was associated with a SNP in dynein, axonemal, heavy chain 5 (DNAH5), a gene in which genetic variants can cause primary ciliary dyskinesia. DNAH5 could have an effect on hyperinflation in COPD. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12931-014-0097-y) contains supplementary material, which is available to authorized users. BioMed Central 2014-08-20 2014 /pmc/articles/PMC4169636/ /pubmed/25134640 http://dx.doi.org/10.1186/s12931-014-0097-y Text en © Lee et al.; licensee BioMed Central Ltd. 2014 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Lee, Jin Hwa McDonald, Merry-Lynn N Cho, Michael H Wan, Emily S Castaldi, Peter J Hunninghake, Gary M Marchetti, Nathaniel Lynch, David A Crapo, James D Lomas, David A Coxson, Harvey O Bakke, Per S Silverman, Edwin K Hersh, Craig P DNAH5 is associated with total lung capacity in chronic obstructive pulmonary disease |
title | DNAH5 is associated with total lung capacity in chronic obstructive pulmonary disease |
title_full | DNAH5 is associated with total lung capacity in chronic obstructive pulmonary disease |
title_fullStr | DNAH5 is associated with total lung capacity in chronic obstructive pulmonary disease |
title_full_unstemmed | DNAH5 is associated with total lung capacity in chronic obstructive pulmonary disease |
title_short | DNAH5 is associated with total lung capacity in chronic obstructive pulmonary disease |
title_sort | dnah5 is associated with total lung capacity in chronic obstructive pulmonary disease |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4169636/ https://www.ncbi.nlm.nih.gov/pubmed/25134640 http://dx.doi.org/10.1186/s12931-014-0097-y |
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