Cargando…
Dissecting the Space-Time Structure of Tree-Ring Datasets Using the Partial Triadic Analysis
Tree-ring datasets are used in a variety of circumstances, including archeology, climatology, forest ecology, and wood technology. These data are based on microdensity profiles and consist of a set of tree-ring descriptors, such as ring width or early/latewood density, measured for a set of individu...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2014
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4172773/ https://www.ncbi.nlm.nih.gov/pubmed/25247299 http://dx.doi.org/10.1371/journal.pone.0108332 |
_version_ | 1782336069829656576 |
---|---|
author | Rossi, Jean-Pierre Nardin, Maxime Godefroid, Martin Ruiz-Diaz, Manuela Sergent, Anne-Sophie Martinez-Meier, Alejandro Pâques, Luc Rozenberg, Philippe |
author_facet | Rossi, Jean-Pierre Nardin, Maxime Godefroid, Martin Ruiz-Diaz, Manuela Sergent, Anne-Sophie Martinez-Meier, Alejandro Pâques, Luc Rozenberg, Philippe |
author_sort | Rossi, Jean-Pierre |
collection | PubMed |
description | Tree-ring datasets are used in a variety of circumstances, including archeology, climatology, forest ecology, and wood technology. These data are based on microdensity profiles and consist of a set of tree-ring descriptors, such as ring width or early/latewood density, measured for a set of individual trees. Because successive rings correspond to successive years, the resulting dataset is a ring variables × trees × time datacube. Multivariate statistical analyses, such as principal component analysis, have been widely used for extracting worthwhile information from ring datasets, but they typically address two-way matrices, such as ring variables × trees or ring variables × time. Here, we explore the potential of the partial triadic analysis (PTA), a multivariate method dedicated to the analysis of three-way datasets, to apprehend the space-time structure of tree-ring datasets. We analyzed a set of 11 tree-ring descriptors measured in 149 georeferenced individuals of European larch (Larix decidua Miller) during the period of 1967–2007. The processing of densitometry profiles led to a set of ring descriptors for each tree and for each year from 1967–2007. The resulting three-way data table was subjected to two distinct analyses in order to explore i) the temporal evolution of spatial structures and ii) the spatial structure of temporal dynamics. We report the presence of a spatial structure common to the different years, highlighting the inter-individual variability of the ring descriptors at the stand scale. We found a temporal trajectory common to the trees that could be separated into a high and low frequency signal, corresponding to inter-annual variations possibly related to defoliation events and a long-term trend possibly related to climate change. We conclude that PTA is a powerful tool to unravel and hierarchize the different sources of variation within tree-ring datasets. |
format | Online Article Text |
id | pubmed-4172773 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-41727732014-10-02 Dissecting the Space-Time Structure of Tree-Ring Datasets Using the Partial Triadic Analysis Rossi, Jean-Pierre Nardin, Maxime Godefroid, Martin Ruiz-Diaz, Manuela Sergent, Anne-Sophie Martinez-Meier, Alejandro Pâques, Luc Rozenberg, Philippe PLoS One Research Article Tree-ring datasets are used in a variety of circumstances, including archeology, climatology, forest ecology, and wood technology. These data are based on microdensity profiles and consist of a set of tree-ring descriptors, such as ring width or early/latewood density, measured for a set of individual trees. Because successive rings correspond to successive years, the resulting dataset is a ring variables × trees × time datacube. Multivariate statistical analyses, such as principal component analysis, have been widely used for extracting worthwhile information from ring datasets, but they typically address two-way matrices, such as ring variables × trees or ring variables × time. Here, we explore the potential of the partial triadic analysis (PTA), a multivariate method dedicated to the analysis of three-way datasets, to apprehend the space-time structure of tree-ring datasets. We analyzed a set of 11 tree-ring descriptors measured in 149 georeferenced individuals of European larch (Larix decidua Miller) during the period of 1967–2007. The processing of densitometry profiles led to a set of ring descriptors for each tree and for each year from 1967–2007. The resulting three-way data table was subjected to two distinct analyses in order to explore i) the temporal evolution of spatial structures and ii) the spatial structure of temporal dynamics. We report the presence of a spatial structure common to the different years, highlighting the inter-individual variability of the ring descriptors at the stand scale. We found a temporal trajectory common to the trees that could be separated into a high and low frequency signal, corresponding to inter-annual variations possibly related to defoliation events and a long-term trend possibly related to climate change. We conclude that PTA is a powerful tool to unravel and hierarchize the different sources of variation within tree-ring datasets. Public Library of Science 2014-09-23 /pmc/articles/PMC4172773/ /pubmed/25247299 http://dx.doi.org/10.1371/journal.pone.0108332 Text en © 2014 Rossi et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Rossi, Jean-Pierre Nardin, Maxime Godefroid, Martin Ruiz-Diaz, Manuela Sergent, Anne-Sophie Martinez-Meier, Alejandro Pâques, Luc Rozenberg, Philippe Dissecting the Space-Time Structure of Tree-Ring Datasets Using the Partial Triadic Analysis |
title | Dissecting the Space-Time Structure of Tree-Ring Datasets Using the Partial Triadic Analysis |
title_full | Dissecting the Space-Time Structure of Tree-Ring Datasets Using the Partial Triadic Analysis |
title_fullStr | Dissecting the Space-Time Structure of Tree-Ring Datasets Using the Partial Triadic Analysis |
title_full_unstemmed | Dissecting the Space-Time Structure of Tree-Ring Datasets Using the Partial Triadic Analysis |
title_short | Dissecting the Space-Time Structure of Tree-Ring Datasets Using the Partial Triadic Analysis |
title_sort | dissecting the space-time structure of tree-ring datasets using the partial triadic analysis |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4172773/ https://www.ncbi.nlm.nih.gov/pubmed/25247299 http://dx.doi.org/10.1371/journal.pone.0108332 |
work_keys_str_mv | AT rossijeanpierre dissectingthespacetimestructureoftreeringdatasetsusingthepartialtriadicanalysis AT nardinmaxime dissectingthespacetimestructureoftreeringdatasetsusingthepartialtriadicanalysis AT godefroidmartin dissectingthespacetimestructureoftreeringdatasetsusingthepartialtriadicanalysis AT ruizdiazmanuela dissectingthespacetimestructureoftreeringdatasetsusingthepartialtriadicanalysis AT sergentannesophie dissectingthespacetimestructureoftreeringdatasetsusingthepartialtriadicanalysis AT martinezmeieralejandro dissectingthespacetimestructureoftreeringdatasetsusingthepartialtriadicanalysis AT paquesluc dissectingthespacetimestructureoftreeringdatasetsusingthepartialtriadicanalysis AT rozenbergphilippe dissectingthespacetimestructureoftreeringdatasetsusingthepartialtriadicanalysis |