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Development and Practical Use of RT-PCR for Seed-transmitted Prune dwarf virus in Quarantine

Among imported plants, seeds are the items that have many latent pathogens and are difficult to inspect. Also, they are the import and export items whose market is expected to expand. The biggest problem with seeds is viruses. Prune dwarf virus (PDV) is the virus that is commonly inspected in Prunus...

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Autores principales: Lee, Siwon, Shin, Yong-Gil
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Korean Society of Plant Pathology 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4174841/
https://www.ncbi.nlm.nih.gov/pubmed/25289000
http://dx.doi.org/10.5423/PPJ.NT.10.2013.0099
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author Lee, Siwon
Shin, Yong-Gil
author_facet Lee, Siwon
Shin, Yong-Gil
author_sort Lee, Siwon
collection PubMed
description Among imported plants, seeds are the items that have many latent pathogens and are difficult to inspect. Also, they are the import and export items whose market is expected to expand. The biggest problem with seeds is viruses. Prune dwarf virus (PDV) is the virus that is commonly inspected in Prunus cerasifera, P. persica, P. armeniaca, P. mandshurica, P. cerasus, P. avium or P. serotina seeds. In this study, two RT-PCR primer sets, which can promptly and specifically diagnose plant quarantine seed-transmitted PDV, were developed; and nested PCR primers, where products amplify 739 and 673 nucleotides (nt), and an nested PCR-product, 305 nt, can be obtained as these products are amplified again, were developed. Also, a modified-positive control plasmid was developed, where the restriction enzyme XhoI, which can identify the contamination of samples from the control, was inserted. The method developed in this study has detected PDV in 18 cases since 2007, and is expected to continuously contribute to the plant quarantine in Korea.
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spelling pubmed-41748412014-10-06 Development and Practical Use of RT-PCR for Seed-transmitted Prune dwarf virus in Quarantine Lee, Siwon Shin, Yong-Gil Plant Pathol J Note Among imported plants, seeds are the items that have many latent pathogens and are difficult to inspect. Also, they are the import and export items whose market is expected to expand. The biggest problem with seeds is viruses. Prune dwarf virus (PDV) is the virus that is commonly inspected in Prunus cerasifera, P. persica, P. armeniaca, P. mandshurica, P. cerasus, P. avium or P. serotina seeds. In this study, two RT-PCR primer sets, which can promptly and specifically diagnose plant quarantine seed-transmitted PDV, were developed; and nested PCR primers, where products amplify 739 and 673 nucleotides (nt), and an nested PCR-product, 305 nt, can be obtained as these products are amplified again, were developed. Also, a modified-positive control plasmid was developed, where the restriction enzyme XhoI, which can identify the contamination of samples from the control, was inserted. The method developed in this study has detected PDV in 18 cases since 2007, and is expected to continuously contribute to the plant quarantine in Korea. Korean Society of Plant Pathology 2014-06 /pmc/articles/PMC4174841/ /pubmed/25289000 http://dx.doi.org/10.5423/PPJ.NT.10.2013.0099 Text en ©The Korean Society of Plant Pathology This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Note
Lee, Siwon
Shin, Yong-Gil
Development and Practical Use of RT-PCR for Seed-transmitted Prune dwarf virus in Quarantine
title Development and Practical Use of RT-PCR for Seed-transmitted Prune dwarf virus in Quarantine
title_full Development and Practical Use of RT-PCR for Seed-transmitted Prune dwarf virus in Quarantine
title_fullStr Development and Practical Use of RT-PCR for Seed-transmitted Prune dwarf virus in Quarantine
title_full_unstemmed Development and Practical Use of RT-PCR for Seed-transmitted Prune dwarf virus in Quarantine
title_short Development and Practical Use of RT-PCR for Seed-transmitted Prune dwarf virus in Quarantine
title_sort development and practical use of rt-pcr for seed-transmitted prune dwarf virus in quarantine
topic Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4174841/
https://www.ncbi.nlm.nih.gov/pubmed/25289000
http://dx.doi.org/10.5423/PPJ.NT.10.2013.0099
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