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Genetic Variability and Population Structure of Disanthus cercidifolius subsp. longipes (Hamamelidaceae) Based on AFLP Analysis

Disanthus cercidifolius subsp. longipes is an endangered species in China. Genetic diversity and structure analysis of this species was investigated using amplified fragments length polymorphism (AFLP) fingerprinting. Nei's gene diversity ranged from 0.1290 to 0.1394. The AMOVA indicated that 7...

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Autores principales: Yu, Yi, Fan, Qiang, Shen, Rujiang, Guo, Wei, Jin, Jianhua, Cui, Dafang, Liao, Wenbo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4175077/
https://www.ncbi.nlm.nih.gov/pubmed/25250583
http://dx.doi.org/10.1371/journal.pone.0107769
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author Yu, Yi
Fan, Qiang
Shen, Rujiang
Guo, Wei
Jin, Jianhua
Cui, Dafang
Liao, Wenbo
author_facet Yu, Yi
Fan, Qiang
Shen, Rujiang
Guo, Wei
Jin, Jianhua
Cui, Dafang
Liao, Wenbo
author_sort Yu, Yi
collection PubMed
description Disanthus cercidifolius subsp. longipes is an endangered species in China. Genetic diversity and structure analysis of this species was investigated using amplified fragments length polymorphism (AFLP) fingerprinting. Nei's gene diversity ranged from 0.1290 to 0.1394. The AMOVA indicated that 75.06% of variation was distributed within populations, while the between-group component 5.04% was smaller than the between populations-within-group component 19.90%. Significant genetic differentiation was detected between populations. Genetic and geographical distances were not correlated. PCA and genetic structure analysis showed that populations from East China were together with those of the Nanling Range. These patterns of genetic diversity and levels of genetic variation may be the result of D. c. subsp. longipes restricted to several isolated habitats and “excess flowers production, but little fruit set”. It is necessary to protect all existing populations of D. c. subsp. longipes in order to preserve as much genetic variation as possible.
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spelling pubmed-41750772014-10-02 Genetic Variability and Population Structure of Disanthus cercidifolius subsp. longipes (Hamamelidaceae) Based on AFLP Analysis Yu, Yi Fan, Qiang Shen, Rujiang Guo, Wei Jin, Jianhua Cui, Dafang Liao, Wenbo PLoS One Research Article Disanthus cercidifolius subsp. longipes is an endangered species in China. Genetic diversity and structure analysis of this species was investigated using amplified fragments length polymorphism (AFLP) fingerprinting. Nei's gene diversity ranged from 0.1290 to 0.1394. The AMOVA indicated that 75.06% of variation was distributed within populations, while the between-group component 5.04% was smaller than the between populations-within-group component 19.90%. Significant genetic differentiation was detected between populations. Genetic and geographical distances were not correlated. PCA and genetic structure analysis showed that populations from East China were together with those of the Nanling Range. These patterns of genetic diversity and levels of genetic variation may be the result of D. c. subsp. longipes restricted to several isolated habitats and “excess flowers production, but little fruit set”. It is necessary to protect all existing populations of D. c. subsp. longipes in order to preserve as much genetic variation as possible. Public Library of Science 2014-09-24 /pmc/articles/PMC4175077/ /pubmed/25250583 http://dx.doi.org/10.1371/journal.pone.0107769 Text en © 2014 Yu et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Yu, Yi
Fan, Qiang
Shen, Rujiang
Guo, Wei
Jin, Jianhua
Cui, Dafang
Liao, Wenbo
Genetic Variability and Population Structure of Disanthus cercidifolius subsp. longipes (Hamamelidaceae) Based on AFLP Analysis
title Genetic Variability and Population Structure of Disanthus cercidifolius subsp. longipes (Hamamelidaceae) Based on AFLP Analysis
title_full Genetic Variability and Population Structure of Disanthus cercidifolius subsp. longipes (Hamamelidaceae) Based on AFLP Analysis
title_fullStr Genetic Variability and Population Structure of Disanthus cercidifolius subsp. longipes (Hamamelidaceae) Based on AFLP Analysis
title_full_unstemmed Genetic Variability and Population Structure of Disanthus cercidifolius subsp. longipes (Hamamelidaceae) Based on AFLP Analysis
title_short Genetic Variability and Population Structure of Disanthus cercidifolius subsp. longipes (Hamamelidaceae) Based on AFLP Analysis
title_sort genetic variability and population structure of disanthus cercidifolius subsp. longipes (hamamelidaceae) based on aflp analysis
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4175077/
https://www.ncbi.nlm.nih.gov/pubmed/25250583
http://dx.doi.org/10.1371/journal.pone.0107769
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