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Evaluation of atlas-based auto-segmentation software in prostate cancer patients
INTRODUCTION: The performance and limitations of an atlas-based auto-segmentation software package (ABAS; Elekta Inc.) was evaluated using male pelvic anatomy as the area of interest. METHODS: Contours from 10 prostate patients were selected to create atlases in ABAS. The contoured regions of intere...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BlackWell Publishing Ltd
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4175851/ https://www.ncbi.nlm.nih.gov/pubmed/26229651 http://dx.doi.org/10.1002/jmrs.64 |
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author | Greenham, Stuart Dean, Jenna Fu, Cheuk Kuen Kenneth Goman, Joanne Mulligan, Jeremy Tune, Deanna Sampson, David Westhuyzen, Justin McKay, Michael |
author_facet | Greenham, Stuart Dean, Jenna Fu, Cheuk Kuen Kenneth Goman, Joanne Mulligan, Jeremy Tune, Deanna Sampson, David Westhuyzen, Justin McKay, Michael |
author_sort | Greenham, Stuart |
collection | PubMed |
description | INTRODUCTION: The performance and limitations of an atlas-based auto-segmentation software package (ABAS; Elekta Inc.) was evaluated using male pelvic anatomy as the area of interest. METHODS: Contours from 10 prostate patients were selected to create atlases in ABAS. The contoured regions of interest were created manually to align with published guidelines and included the prostate, bladder, rectum, femoral heads and external patient contour. Twenty-four clinically treated prostate patients were auto-contoured using a randomised selection of two, four, six, eight or ten atlases. The concordance between the manually drawn and computer-generated contours were evaluated statistically using Pearson's product–moment correlation coefficient (r) and clinically in a validated qualitative evaluation. In the latter evaluation, six radiation therapists classified the degree of agreement for each structure using seven clinically appropriate categories. RESULTS: The ABAS software generated clinically acceptable contours for the bladder, rectum, femoral heads and external patient contour. For these structures, ABAS-generated volumes were highly correlated with ‘as treated’ volumes, manually drawn; for four atlases, for example, bladder r = 0.988 (P < 0.001), rectum r = 0.739 (P < 0.001) and left femoral head r = 0.560 (P < 0.001). Poorest results were seen for the prostate (r = 0.401, P < 0.05) (four atlases); however this was attributed to the comparison prostate volume being contoured on magnetic resonance imaging (MRI) rather than computed tomography (CT) data. For all structures, increasing the number of atlases did not consistently improve accuracy. CONCLUSIONS: ABAS-generated contours are clinically useful for a range of structures in the male pelvis. Clinically appropriate volumes were created, but editing of some contours was inevitably required. The ideal number of atlases to improve generated automatic contours is yet to be determined. |
format | Online Article Text |
id | pubmed-4175851 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | BlackWell Publishing Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-41758512014-09-30 Evaluation of atlas-based auto-segmentation software in prostate cancer patients Greenham, Stuart Dean, Jenna Fu, Cheuk Kuen Kenneth Goman, Joanne Mulligan, Jeremy Tune, Deanna Sampson, David Westhuyzen, Justin McKay, Michael J Med Radiat Sci Original Articles INTRODUCTION: The performance and limitations of an atlas-based auto-segmentation software package (ABAS; Elekta Inc.) was evaluated using male pelvic anatomy as the area of interest. METHODS: Contours from 10 prostate patients were selected to create atlases in ABAS. The contoured regions of interest were created manually to align with published guidelines and included the prostate, bladder, rectum, femoral heads and external patient contour. Twenty-four clinically treated prostate patients were auto-contoured using a randomised selection of two, four, six, eight or ten atlases. The concordance between the manually drawn and computer-generated contours were evaluated statistically using Pearson's product–moment correlation coefficient (r) and clinically in a validated qualitative evaluation. In the latter evaluation, six radiation therapists classified the degree of agreement for each structure using seven clinically appropriate categories. RESULTS: The ABAS software generated clinically acceptable contours for the bladder, rectum, femoral heads and external patient contour. For these structures, ABAS-generated volumes were highly correlated with ‘as treated’ volumes, manually drawn; for four atlases, for example, bladder r = 0.988 (P < 0.001), rectum r = 0.739 (P < 0.001) and left femoral head r = 0.560 (P < 0.001). Poorest results were seen for the prostate (r = 0.401, P < 0.05) (four atlases); however this was attributed to the comparison prostate volume being contoured on magnetic resonance imaging (MRI) rather than computed tomography (CT) data. For all structures, increasing the number of atlases did not consistently improve accuracy. CONCLUSIONS: ABAS-generated contours are clinically useful for a range of structures in the male pelvis. Clinically appropriate volumes were created, but editing of some contours was inevitably required. The ideal number of atlases to improve generated automatic contours is yet to be determined. BlackWell Publishing Ltd 2014-09 2014-08-06 /pmc/articles/PMC4175851/ /pubmed/26229651 http://dx.doi.org/10.1002/jmrs.64 Text en © 2014 The Authors. Journal of Medical Radiation Sciences published by Wiley Publishing Asia Pty Ltd on behalf of Australian Institute of Radiography and New Zealand Institute of Medical Radiation Technology. http://creativecommons.org/licenses/by-nc/3.0/ This is an open access article under the terms of the Creative Commons Attribution-NonCommercial License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes. |
spellingShingle | Original Articles Greenham, Stuart Dean, Jenna Fu, Cheuk Kuen Kenneth Goman, Joanne Mulligan, Jeremy Tune, Deanna Sampson, David Westhuyzen, Justin McKay, Michael Evaluation of atlas-based auto-segmentation software in prostate cancer patients |
title | Evaluation of atlas-based auto-segmentation software in prostate cancer patients |
title_full | Evaluation of atlas-based auto-segmentation software in prostate cancer patients |
title_fullStr | Evaluation of atlas-based auto-segmentation software in prostate cancer patients |
title_full_unstemmed | Evaluation of atlas-based auto-segmentation software in prostate cancer patients |
title_short | Evaluation of atlas-based auto-segmentation software in prostate cancer patients |
title_sort | evaluation of atlas-based auto-segmentation software in prostate cancer patients |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4175851/ https://www.ncbi.nlm.nih.gov/pubmed/26229651 http://dx.doi.org/10.1002/jmrs.64 |
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