Cargando…

Contourlet Textual Features: Improving the Diagnosis of Solitary Pulmonary Nodules in Two Dimensional CT Images

OBJECTIVE: To determine the value of contourlet textural features obtained from solitary pulmonary nodules in two dimensional CT images used in diagnoses of lung cancer. MATERIALS AND METHODS: A total of 6,299 CT images were acquired from 336 patients, with 1,454 benign pulmonary nodule images from...

Descripción completa

Detalles Bibliográficos
Autores principales: Wang, Jingjing, Sun, Tao, Gao, Ni, Menon, Desmond Dev, Luo, Yanxia, Gao, Qi, Li, Xia, Wang, Wei, Zhu, Huiping, Lv, Pingxin, Liang, Zhigang, Tao, Lixin, Liu, Xiangtong, Guo, Xiuhua
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4177406/
https://www.ncbi.nlm.nih.gov/pubmed/25250576
http://dx.doi.org/10.1371/journal.pone.0108465
_version_ 1782336766904107008
author Wang, Jingjing
Sun, Tao
Gao, Ni
Menon, Desmond Dev
Luo, Yanxia
Gao, Qi
Li, Xia
Wang, Wei
Zhu, Huiping
Lv, Pingxin
Liang, Zhigang
Tao, Lixin
Liu, Xiangtong
Guo, Xiuhua
author_facet Wang, Jingjing
Sun, Tao
Gao, Ni
Menon, Desmond Dev
Luo, Yanxia
Gao, Qi
Li, Xia
Wang, Wei
Zhu, Huiping
Lv, Pingxin
Liang, Zhigang
Tao, Lixin
Liu, Xiangtong
Guo, Xiuhua
author_sort Wang, Jingjing
collection PubMed
description OBJECTIVE: To determine the value of contourlet textural features obtained from solitary pulmonary nodules in two dimensional CT images used in diagnoses of lung cancer. MATERIALS AND METHODS: A total of 6,299 CT images were acquired from 336 patients, with 1,454 benign pulmonary nodule images from 84 patients (50 male, 34 female) and 4,845 malignant from 252 patients (150 male, 102 female). Further to this, nineteen patient information categories, which included seven demographic parameters and twelve morphological features, were also collected. A contourlet was used to extract fourteen types of textural features. These were then used to establish three support vector machine models. One comprised a database constructed of nineteen collected patient information categories, another included contourlet textural features and the third one contained both sets of information. Ten-fold cross-validation was used to evaluate the diagnosis results for the three databases, with sensitivity, specificity, accuracy, the area under the curve (AUC), precision, Youden index, and F-measure were used as the assessment criteria. In addition, the synthetic minority over-sampling technique (SMOTE) was used to preprocess the unbalanced data. RESULTS: Using a database containing textural features and patient information, sensitivity, specificity, accuracy, AUC, precision, Youden index, and F-measure were: 0.95, 0.71, 0.89, 0.89, 0.92, 0.66, and 0.93 respectively. These results were higher than results derived using the database without textural features (0.82, 0.47, 0.74, 0.67, 0.84, 0.29, and 0.83 respectively) as well as the database comprising only textural features (0.81, 0.64, 0.67, 0.72, 0.88, 0.44, and 0.85 respectively). Using the SMOTE as a pre-processing procedure, new balanced database generated, including observations of 5,816 benign ROIs and 5,815 malignant ROIs, and accuracy was 0.93. CONCLUSION: Our results indicate that the combined contourlet textural features of solitary pulmonary nodules in CT images with patient profile information could potentially improve the diagnosis of lung cancer.
format Online
Article
Text
id pubmed-4177406
institution National Center for Biotechnology Information
language English
publishDate 2014
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-41774062014-10-02 Contourlet Textual Features: Improving the Diagnosis of Solitary Pulmonary Nodules in Two Dimensional CT Images Wang, Jingjing Sun, Tao Gao, Ni Menon, Desmond Dev Luo, Yanxia Gao, Qi Li, Xia Wang, Wei Zhu, Huiping Lv, Pingxin Liang, Zhigang Tao, Lixin Liu, Xiangtong Guo, Xiuhua PLoS One Research Article OBJECTIVE: To determine the value of contourlet textural features obtained from solitary pulmonary nodules in two dimensional CT images used in diagnoses of lung cancer. MATERIALS AND METHODS: A total of 6,299 CT images were acquired from 336 patients, with 1,454 benign pulmonary nodule images from 84 patients (50 male, 34 female) and 4,845 malignant from 252 patients (150 male, 102 female). Further to this, nineteen patient information categories, which included seven demographic parameters and twelve morphological features, were also collected. A contourlet was used to extract fourteen types of textural features. These were then used to establish three support vector machine models. One comprised a database constructed of nineteen collected patient information categories, another included contourlet textural features and the third one contained both sets of information. Ten-fold cross-validation was used to evaluate the diagnosis results for the three databases, with sensitivity, specificity, accuracy, the area under the curve (AUC), precision, Youden index, and F-measure were used as the assessment criteria. In addition, the synthetic minority over-sampling technique (SMOTE) was used to preprocess the unbalanced data. RESULTS: Using a database containing textural features and patient information, sensitivity, specificity, accuracy, AUC, precision, Youden index, and F-measure were: 0.95, 0.71, 0.89, 0.89, 0.92, 0.66, and 0.93 respectively. These results were higher than results derived using the database without textural features (0.82, 0.47, 0.74, 0.67, 0.84, 0.29, and 0.83 respectively) as well as the database comprising only textural features (0.81, 0.64, 0.67, 0.72, 0.88, 0.44, and 0.85 respectively). Using the SMOTE as a pre-processing procedure, new balanced database generated, including observations of 5,816 benign ROIs and 5,815 malignant ROIs, and accuracy was 0.93. CONCLUSION: Our results indicate that the combined contourlet textural features of solitary pulmonary nodules in CT images with patient profile information could potentially improve the diagnosis of lung cancer. Public Library of Science 2014-09-24 /pmc/articles/PMC4177406/ /pubmed/25250576 http://dx.doi.org/10.1371/journal.pone.0108465 Text en © 2014 Wang et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Wang, Jingjing
Sun, Tao
Gao, Ni
Menon, Desmond Dev
Luo, Yanxia
Gao, Qi
Li, Xia
Wang, Wei
Zhu, Huiping
Lv, Pingxin
Liang, Zhigang
Tao, Lixin
Liu, Xiangtong
Guo, Xiuhua
Contourlet Textual Features: Improving the Diagnosis of Solitary Pulmonary Nodules in Two Dimensional CT Images
title Contourlet Textual Features: Improving the Diagnosis of Solitary Pulmonary Nodules in Two Dimensional CT Images
title_full Contourlet Textual Features: Improving the Diagnosis of Solitary Pulmonary Nodules in Two Dimensional CT Images
title_fullStr Contourlet Textual Features: Improving the Diagnosis of Solitary Pulmonary Nodules in Two Dimensional CT Images
title_full_unstemmed Contourlet Textual Features: Improving the Diagnosis of Solitary Pulmonary Nodules in Two Dimensional CT Images
title_short Contourlet Textual Features: Improving the Diagnosis of Solitary Pulmonary Nodules in Two Dimensional CT Images
title_sort contourlet textual features: improving the diagnosis of solitary pulmonary nodules in two dimensional ct images
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4177406/
https://www.ncbi.nlm.nih.gov/pubmed/25250576
http://dx.doi.org/10.1371/journal.pone.0108465
work_keys_str_mv AT wangjingjing contourlettextualfeaturesimprovingthediagnosisofsolitarypulmonarynodulesintwodimensionalctimages
AT suntao contourlettextualfeaturesimprovingthediagnosisofsolitarypulmonarynodulesintwodimensionalctimages
AT gaoni contourlettextualfeaturesimprovingthediagnosisofsolitarypulmonarynodulesintwodimensionalctimages
AT menondesmonddev contourlettextualfeaturesimprovingthediagnosisofsolitarypulmonarynodulesintwodimensionalctimages
AT luoyanxia contourlettextualfeaturesimprovingthediagnosisofsolitarypulmonarynodulesintwodimensionalctimages
AT gaoqi contourlettextualfeaturesimprovingthediagnosisofsolitarypulmonarynodulesintwodimensionalctimages
AT lixia contourlettextualfeaturesimprovingthediagnosisofsolitarypulmonarynodulesintwodimensionalctimages
AT wangwei contourlettextualfeaturesimprovingthediagnosisofsolitarypulmonarynodulesintwodimensionalctimages
AT zhuhuiping contourlettextualfeaturesimprovingthediagnosisofsolitarypulmonarynodulesintwodimensionalctimages
AT lvpingxin contourlettextualfeaturesimprovingthediagnosisofsolitarypulmonarynodulesintwodimensionalctimages
AT liangzhigang contourlettextualfeaturesimprovingthediagnosisofsolitarypulmonarynodulesintwodimensionalctimages
AT taolixin contourlettextualfeaturesimprovingthediagnosisofsolitarypulmonarynodulesintwodimensionalctimages
AT liuxiangtong contourlettextualfeaturesimprovingthediagnosisofsolitarypulmonarynodulesintwodimensionalctimages
AT guoxiuhua contourlettextualfeaturesimprovingthediagnosisofsolitarypulmonarynodulesintwodimensionalctimages