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Crystal Structure of Talaromyces cellulolyticus (Formerly Known as Acremonium cellulolyticus) GH Family 11 Xylanase

Talaromyces cellulolyticus (formerly known as Acremonium cellulolyticus) is one of the mesophilic fungi that can produce high levels of cellulose-related enzymes and are expected to be used for the degradation of polysaccharide biomass. In silico analysis of the genome sequence of T. cellulolyticus...

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Autores principales: Kataoka, Misumi, Akita, Fusamichi, Maeno, Yuka, Inoue, Benchaporn, Inoue, Hiroyuki, Ishikawa, Kazuhiko
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4177571/
https://www.ncbi.nlm.nih.gov/pubmed/25138599
http://dx.doi.org/10.1007/s12010-014-1130-9
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author Kataoka, Misumi
Akita, Fusamichi
Maeno, Yuka
Inoue, Benchaporn
Inoue, Hiroyuki
Ishikawa, Kazuhiko
author_facet Kataoka, Misumi
Akita, Fusamichi
Maeno, Yuka
Inoue, Benchaporn
Inoue, Hiroyuki
Ishikawa, Kazuhiko
author_sort Kataoka, Misumi
collection PubMed
description Talaromyces cellulolyticus (formerly known as Acremonium cellulolyticus) is one of the mesophilic fungi that can produce high levels of cellulose-related enzymes and are expected to be used for the degradation of polysaccharide biomass. In silico analysis of the genome sequence of T. cellulolyticus detected seven open reading frames (ORFs) showing homology to xylanases from glycoside hydrolase (GH) family 11. The gene encoding the GH11 xylanase C (TcXylC) with the highest activity was used for overproduction and purification of the recombinant enzyme, permitting solving of the crystal structure to a resolution of 1.98 Å. In the asymmetric unit, two kinds of the crystal structures of the xylanase were identified. The main structure of the protein showed a β-jelly roll structure. We hypothesize that one of the two structures represents the open form and the other shows the close form. The changing of the flexible region between the two structures is presumed to induce and accelerate the enzyme reaction. The specificity of xylanase toward the branched xylan is discussed in the context of this structural data and by comparison with the other published structures of xylanases.
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spelling pubmed-41775712014-09-30 Crystal Structure of Talaromyces cellulolyticus (Formerly Known as Acremonium cellulolyticus) GH Family 11 Xylanase Kataoka, Misumi Akita, Fusamichi Maeno, Yuka Inoue, Benchaporn Inoue, Hiroyuki Ishikawa, Kazuhiko Appl Biochem Biotechnol Article Talaromyces cellulolyticus (formerly known as Acremonium cellulolyticus) is one of the mesophilic fungi that can produce high levels of cellulose-related enzymes and are expected to be used for the degradation of polysaccharide biomass. In silico analysis of the genome sequence of T. cellulolyticus detected seven open reading frames (ORFs) showing homology to xylanases from glycoside hydrolase (GH) family 11. The gene encoding the GH11 xylanase C (TcXylC) with the highest activity was used for overproduction and purification of the recombinant enzyme, permitting solving of the crystal structure to a resolution of 1.98 Å. In the asymmetric unit, two kinds of the crystal structures of the xylanase were identified. The main structure of the protein showed a β-jelly roll structure. We hypothesize that one of the two structures represents the open form and the other shows the close form. The changing of the flexible region between the two structures is presumed to induce and accelerate the enzyme reaction. The specificity of xylanase toward the branched xylan is discussed in the context of this structural data and by comparison with the other published structures of xylanases. Springer US 2014-08-20 2014 /pmc/articles/PMC4177571/ /pubmed/25138599 http://dx.doi.org/10.1007/s12010-014-1130-9 Text en © The Author(s) 2014 https://creativecommons.org/licenses/by/4.0/ Open AccessThis article is distributed under the terms of the Creative Commons Attribution License which permits any use, distribution, and reproduction in any medium, provided the original author(s) and the source are credited.
spellingShingle Article
Kataoka, Misumi
Akita, Fusamichi
Maeno, Yuka
Inoue, Benchaporn
Inoue, Hiroyuki
Ishikawa, Kazuhiko
Crystal Structure of Talaromyces cellulolyticus (Formerly Known as Acremonium cellulolyticus) GH Family 11 Xylanase
title Crystal Structure of Talaromyces cellulolyticus (Formerly Known as Acremonium cellulolyticus) GH Family 11 Xylanase
title_full Crystal Structure of Talaromyces cellulolyticus (Formerly Known as Acremonium cellulolyticus) GH Family 11 Xylanase
title_fullStr Crystal Structure of Talaromyces cellulolyticus (Formerly Known as Acremonium cellulolyticus) GH Family 11 Xylanase
title_full_unstemmed Crystal Structure of Talaromyces cellulolyticus (Formerly Known as Acremonium cellulolyticus) GH Family 11 Xylanase
title_short Crystal Structure of Talaromyces cellulolyticus (Formerly Known as Acremonium cellulolyticus) GH Family 11 Xylanase
title_sort crystal structure of talaromyces cellulolyticus (formerly known as acremonium cellulolyticus) gh family 11 xylanase
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4177571/
https://www.ncbi.nlm.nih.gov/pubmed/25138599
http://dx.doi.org/10.1007/s12010-014-1130-9
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