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Computational science: shifting the focus from tools to models
Computational techniques have revolutionized many aspects of scientific research over the last few decades. Experimentalists use computation for data analysis, processing ever bigger data sets. Theoreticians compute predictions from ever more complex models. However, traditional articles do not perm...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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F1000Research
2014
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4184301/ https://www.ncbi.nlm.nih.gov/pubmed/25309728 http://dx.doi.org/10.12688/f1000research.3978.2 |
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author | Hinsen, Konrad |
author_facet | Hinsen, Konrad |
author_sort | Hinsen, Konrad |
collection | PubMed |
description | Computational techniques have revolutionized many aspects of scientific research over the last few decades. Experimentalists use computation for data analysis, processing ever bigger data sets. Theoreticians compute predictions from ever more complex models. However, traditional articles do not permit the publication of big data sets or complex models. As a consequence, these crucial pieces of information no longer enter the scientific record. Moreover, they have become prisoners of scientific software: many models exist only as software implementations, and the data are often stored in proprietary formats defined by the software. In this article, I argue that this emphasis on software tools over models and data is detrimental to science in the long term, and I propose a means by which this can be reversed. |
format | Online Article Text |
id | pubmed-4184301 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | F1000Research |
record_format | MEDLINE/PubMed |
spelling | pubmed-41843012014-10-09 Computational science: shifting the focus from tools to models Hinsen, Konrad F1000Res Opinion Article Computational techniques have revolutionized many aspects of scientific research over the last few decades. Experimentalists use computation for data analysis, processing ever bigger data sets. Theoreticians compute predictions from ever more complex models. However, traditional articles do not permit the publication of big data sets or complex models. As a consequence, these crucial pieces of information no longer enter the scientific record. Moreover, they have become prisoners of scientific software: many models exist only as software implementations, and the data are often stored in proprietary formats defined by the software. In this article, I argue that this emphasis on software tools over models and data is detrimental to science in the long term, and I propose a means by which this can be reversed. F1000Research 2014-06-17 /pmc/articles/PMC4184301/ /pubmed/25309728 http://dx.doi.org/10.12688/f1000research.3978.2 Text en Copyright: © 2014 Hinsen K http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. http://creativecommons.org/publicdomain/zero/1.0/ Data associated with the article are available under the terms of the Creative Commons Zero "No rights reserved" data waiver (CC0 1.0 Public domain dedication). |
spellingShingle | Opinion Article Hinsen, Konrad Computational science: shifting the focus from tools to models |
title | Computational science: shifting the focus from tools to models |
title_full | Computational science: shifting the focus from tools to models |
title_fullStr | Computational science: shifting the focus from tools to models |
title_full_unstemmed | Computational science: shifting the focus from tools to models |
title_short | Computational science: shifting the focus from tools to models |
title_sort | computational science: shifting the focus from tools to models |
topic | Opinion Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4184301/ https://www.ncbi.nlm.nih.gov/pubmed/25309728 http://dx.doi.org/10.12688/f1000research.3978.2 |
work_keys_str_mv | AT hinsenkonrad computationalscienceshiftingthefocusfromtoolstomodels |