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Computational science: shifting the focus from tools to models

Computational techniques have revolutionized many aspects of scientific research over the last few decades. Experimentalists use computation for data analysis, processing ever bigger data sets. Theoreticians compute predictions from ever more complex models. However, traditional articles do not perm...

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Detalles Bibliográficos
Autor principal: Hinsen, Konrad
Formato: Online Artículo Texto
Lenguaje:English
Publicado: F1000Research 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4184301/
https://www.ncbi.nlm.nih.gov/pubmed/25309728
http://dx.doi.org/10.12688/f1000research.3978.2
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author Hinsen, Konrad
author_facet Hinsen, Konrad
author_sort Hinsen, Konrad
collection PubMed
description Computational techniques have revolutionized many aspects of scientific research over the last few decades. Experimentalists use computation for data analysis, processing ever bigger data sets. Theoreticians compute predictions from ever more complex models. However, traditional articles do not permit the publication of big data sets or complex models. As a consequence, these crucial pieces of information no longer enter the scientific record. Moreover, they have become prisoners of scientific software: many models exist only as software implementations, and the data are often stored in proprietary formats defined by the software. In this article, I argue that this emphasis on software tools over models and data is detrimental to science in the long term, and I propose a means by which this can be reversed.
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spelling pubmed-41843012014-10-09 Computational science: shifting the focus from tools to models Hinsen, Konrad F1000Res Opinion Article Computational techniques have revolutionized many aspects of scientific research over the last few decades. Experimentalists use computation for data analysis, processing ever bigger data sets. Theoreticians compute predictions from ever more complex models. However, traditional articles do not permit the publication of big data sets or complex models. As a consequence, these crucial pieces of information no longer enter the scientific record. Moreover, they have become prisoners of scientific software: many models exist only as software implementations, and the data are often stored in proprietary formats defined by the software. In this article, I argue that this emphasis on software tools over models and data is detrimental to science in the long term, and I propose a means by which this can be reversed. F1000Research 2014-06-17 /pmc/articles/PMC4184301/ /pubmed/25309728 http://dx.doi.org/10.12688/f1000research.3978.2 Text en Copyright: © 2014 Hinsen K http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. http://creativecommons.org/publicdomain/zero/1.0/ Data associated with the article are available under the terms of the Creative Commons Zero "No rights reserved" data waiver (CC0 1.0 Public domain dedication).
spellingShingle Opinion Article
Hinsen, Konrad
Computational science: shifting the focus from tools to models
title Computational science: shifting the focus from tools to models
title_full Computational science: shifting the focus from tools to models
title_fullStr Computational science: shifting the focus from tools to models
title_full_unstemmed Computational science: shifting the focus from tools to models
title_short Computational science: shifting the focus from tools to models
title_sort computational science: shifting the focus from tools to models
topic Opinion Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4184301/
https://www.ncbi.nlm.nih.gov/pubmed/25309728
http://dx.doi.org/10.12688/f1000research.3978.2
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