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SkateBase, an elasmobranch genome project and collection of molecular resources for chondrichthyan fishes
Chondrichthyan fishes are a diverse class of gnathostomes that provide a valuable perspective on fundamental characteristics shared by all jawed and limbed vertebrates. Studies of phylogeny, species diversity, population structure, conservation, and physiology are accelerated by genomic, transcripto...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
F1000Research
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4184313/ https://www.ncbi.nlm.nih.gov/pubmed/25309735 http://dx.doi.org/10.12688/f1000research.4996.1 |
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author | Wyffels, Jennifer L. King, Benjamin Vincent, James Chen, Chuming Wu, Cathy H. Polson, Shawn W. |
author_facet | Wyffels, Jennifer L. King, Benjamin Vincent, James Chen, Chuming Wu, Cathy H. Polson, Shawn W. |
author_sort | Wyffels, Jennifer |
collection | PubMed |
description | Chondrichthyan fishes are a diverse class of gnathostomes that provide a valuable perspective on fundamental characteristics shared by all jawed and limbed vertebrates. Studies of phylogeny, species diversity, population structure, conservation, and physiology are accelerated by genomic, transcriptomic and protein sequence data. These data are widely available for many sarcopterygii (coelacanth, lungfish and tetrapods) and actinoptergii (ray-finned fish including teleosts) taxa, but limited for chondrichthyan fishes. In this study, we summarize available data for chondrichthyes and describe resources for one of the largest projects to characterize one of these fish, Leucoraja erinacea, the little skate. SkateBase ( http://skatebase.org) serves as the skate genome project portal linking data, research tools, and teaching resources. |
format | Online Article Text |
id | pubmed-4184313 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | F1000Research |
record_format | MEDLINE/PubMed |
spelling | pubmed-41843132014-10-09 SkateBase, an elasmobranch genome project and collection of molecular resources for chondrichthyan fishes Wyffels, Jennifer L. King, Benjamin Vincent, James Chen, Chuming Wu, Cathy H. Polson, Shawn W. F1000Res Research Article Chondrichthyan fishes are a diverse class of gnathostomes that provide a valuable perspective on fundamental characteristics shared by all jawed and limbed vertebrates. Studies of phylogeny, species diversity, population structure, conservation, and physiology are accelerated by genomic, transcriptomic and protein sequence data. These data are widely available for many sarcopterygii (coelacanth, lungfish and tetrapods) and actinoptergii (ray-finned fish including teleosts) taxa, but limited for chondrichthyan fishes. In this study, we summarize available data for chondrichthyes and describe resources for one of the largest projects to characterize one of these fish, Leucoraja erinacea, the little skate. SkateBase ( http://skatebase.org) serves as the skate genome project portal linking data, research tools, and teaching resources. F1000Research 2014-08-12 /pmc/articles/PMC4184313/ /pubmed/25309735 http://dx.doi.org/10.12688/f1000research.4996.1 Text en Copyright: © 2014 Wyffels J et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. http://creativecommons.org/publicdomain/zero/1.0/ Data associated with the article are available under the terms of the Creative Commons Zero "No rights reserved" data waiver (CC0 1.0 Public domain dedication). |
spellingShingle | Research Article Wyffels, Jennifer L. King, Benjamin Vincent, James Chen, Chuming Wu, Cathy H. Polson, Shawn W. SkateBase, an elasmobranch genome project and collection of molecular resources for chondrichthyan fishes |
title | SkateBase, an elasmobranch genome project and collection of molecular resources for chondrichthyan fishes |
title_full | SkateBase, an elasmobranch genome project and collection of molecular resources for chondrichthyan fishes |
title_fullStr | SkateBase, an elasmobranch genome project and collection of molecular resources for chondrichthyan fishes |
title_full_unstemmed | SkateBase, an elasmobranch genome project and collection of molecular resources for chondrichthyan fishes |
title_short | SkateBase, an elasmobranch genome project and collection of molecular resources for chondrichthyan fishes |
title_sort | skatebase, an elasmobranch genome project and collection of molecular resources for chondrichthyan fishes |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4184313/ https://www.ncbi.nlm.nih.gov/pubmed/25309735 http://dx.doi.org/10.12688/f1000research.4996.1 |
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