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Biological and Analytical Stability of a Peripheral Blood Gene Expression Score for Obstructive Coronary Artery Disease in the PREDICT and COMPASS Studies

A gene expression score (GES) for obstructive coronary artery disease (CAD) has been validated in two multicenter studies. Receiver-operating characteristics (ROC) analysis of the GES on an expanded Personalized Risk Evaluation and Diagnosis in the Coronary Tree (PREDICT) cohort (NCT no. 00500617) w...

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Autores principales: Daniels, Susan E., Beineke, Philip, Rhees, Brian, McPherson, John A., Kraus, William E., Thomas, Gregory S., Rosenberg, Steven
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4185104/
https://www.ncbi.nlm.nih.gov/pubmed/25119856
http://dx.doi.org/10.1007/s12265-014-9583-3
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author Daniels, Susan E.
Beineke, Philip
Rhees, Brian
McPherson, John A.
Kraus, William E.
Thomas, Gregory S.
Rosenberg, Steven
author_facet Daniels, Susan E.
Beineke, Philip
Rhees, Brian
McPherson, John A.
Kraus, William E.
Thomas, Gregory S.
Rosenberg, Steven
author_sort Daniels, Susan E.
collection PubMed
description A gene expression score (GES) for obstructive coronary artery disease (CAD) has been validated in two multicenter studies. Receiver-operating characteristics (ROC) analysis of the GES on an expanded Personalized Risk Evaluation and Diagnosis in the Coronary Tree (PREDICT) cohort (NCT no. 00500617) with CAD defined by quantitative coronary angiography (QCA) or clinical reads yielded similar performance (area under the curve (AUC) = 0.70, N = 1,502) to the original validation cohort (AUC = 0.70, N = 526). Analysis of 138 non-Caucasian and 1,364 Caucasian patients showed very similar performance (AUCs = 0.72 vs. 0.70). To assess analytic stability, stored samples of the original validation cohort (N = 526) was re-tested after 5 years, and the mean score changed from 20.3 to 19.8 after 5 years (N = 501, 95 %). To assess patient scores over time, GES was determined on samples from 173 Coronary Obstruction Detection by Molecular Personalized Gene Expression (COMPASS) study (NCT no. 01117506) patients at approximately 1 year post-enrollment. Mean scores increased slightly from 15.9 to 17.3, corresponding to a 2.5 % increase in obstructive CAD likelihood. Changes in cardiovascular medications did not show a significant change in GES. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s12265-014-9583-3) contains supplementary material, which is available to authorized users.
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spelling pubmed-41851042014-10-08 Biological and Analytical Stability of a Peripheral Blood Gene Expression Score for Obstructive Coronary Artery Disease in the PREDICT and COMPASS Studies Daniels, Susan E. Beineke, Philip Rhees, Brian McPherson, John A. Kraus, William E. Thomas, Gregory S. Rosenberg, Steven J Cardiovasc Transl Res Article A gene expression score (GES) for obstructive coronary artery disease (CAD) has been validated in two multicenter studies. Receiver-operating characteristics (ROC) analysis of the GES on an expanded Personalized Risk Evaluation and Diagnosis in the Coronary Tree (PREDICT) cohort (NCT no. 00500617) with CAD defined by quantitative coronary angiography (QCA) or clinical reads yielded similar performance (area under the curve (AUC) = 0.70, N = 1,502) to the original validation cohort (AUC = 0.70, N = 526). Analysis of 138 non-Caucasian and 1,364 Caucasian patients showed very similar performance (AUCs = 0.72 vs. 0.70). To assess analytic stability, stored samples of the original validation cohort (N = 526) was re-tested after 5 years, and the mean score changed from 20.3 to 19.8 after 5 years (N = 501, 95 %). To assess patient scores over time, GES was determined on samples from 173 Coronary Obstruction Detection by Molecular Personalized Gene Expression (COMPASS) study (NCT no. 01117506) patients at approximately 1 year post-enrollment. Mean scores increased slightly from 15.9 to 17.3, corresponding to a 2.5 % increase in obstructive CAD likelihood. Changes in cardiovascular medications did not show a significant change in GES. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s12265-014-9583-3) contains supplementary material, which is available to authorized users. Springer US 2014-08-14 2014 /pmc/articles/PMC4185104/ /pubmed/25119856 http://dx.doi.org/10.1007/s12265-014-9583-3 Text en © The Author(s) 2014 https://creativecommons.org/licenses/by/4.0/ Open Access This article is distributed under the terms of the Creative Commons Attribution License which permits any use, distribution, and reproduction in any medium, provided the original author(s) and the source are credited.
spellingShingle Article
Daniels, Susan E.
Beineke, Philip
Rhees, Brian
McPherson, John A.
Kraus, William E.
Thomas, Gregory S.
Rosenberg, Steven
Biological and Analytical Stability of a Peripheral Blood Gene Expression Score for Obstructive Coronary Artery Disease in the PREDICT and COMPASS Studies
title Biological and Analytical Stability of a Peripheral Blood Gene Expression Score for Obstructive Coronary Artery Disease in the PREDICT and COMPASS Studies
title_full Biological and Analytical Stability of a Peripheral Blood Gene Expression Score for Obstructive Coronary Artery Disease in the PREDICT and COMPASS Studies
title_fullStr Biological and Analytical Stability of a Peripheral Blood Gene Expression Score for Obstructive Coronary Artery Disease in the PREDICT and COMPASS Studies
title_full_unstemmed Biological and Analytical Stability of a Peripheral Blood Gene Expression Score for Obstructive Coronary Artery Disease in the PREDICT and COMPASS Studies
title_short Biological and Analytical Stability of a Peripheral Blood Gene Expression Score for Obstructive Coronary Artery Disease in the PREDICT and COMPASS Studies
title_sort biological and analytical stability of a peripheral blood gene expression score for obstructive coronary artery disease in the predict and compass studies
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4185104/
https://www.ncbi.nlm.nih.gov/pubmed/25119856
http://dx.doi.org/10.1007/s12265-014-9583-3
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