Cargando…

Operation of the Australian Store.Synchrotron for macromolecular crystallography

The Store.Synchrotron service, a fully functional, cloud computing-based solution to raw X-ray data archiving and dissemination at the Australian Synchrotron, is described. The service automatically receives and archives raw diffraction data, related metadata and preliminary results of automated dat...

Descripción completa

Detalles Bibliográficos
Autores principales: Meyer, Grischa R., Aragão, David, Mudie, Nathan J., Caradoc-Davies, Tom T., McGowan, Sheena, Bertling, Philip J., Groenewegen, David, Quenette, Stevan M., Bond, Charles S., Buckle, Ashley M., Androulakis, Steve
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4187999/
https://www.ncbi.nlm.nih.gov/pubmed/25286837
http://dx.doi.org/10.1107/S1399004714016174
_version_ 1782338204735635456
author Meyer, Grischa R.
Aragão, David
Mudie, Nathan J.
Caradoc-Davies, Tom T.
McGowan, Sheena
Bertling, Philip J.
Groenewegen, David
Quenette, Stevan M.
Bond, Charles S.
Buckle, Ashley M.
Androulakis, Steve
author_facet Meyer, Grischa R.
Aragão, David
Mudie, Nathan J.
Caradoc-Davies, Tom T.
McGowan, Sheena
Bertling, Philip J.
Groenewegen, David
Quenette, Stevan M.
Bond, Charles S.
Buckle, Ashley M.
Androulakis, Steve
author_sort Meyer, Grischa R.
collection PubMed
description The Store.Synchrotron service, a fully functional, cloud computing-based solution to raw X-ray data archiving and dissemination at the Australian Synchrotron, is described. The service automatically receives and archives raw diffraction data, related metadata and preliminary results of automated data-processing workflows. Data are able to be shared with collaborators and opened to the public. In the nine months since its deployment in August 2013, the service has handled over 22.4 TB of raw data (∼1.7 million diffraction images). Several real examples from the Australian crystallographic community are described that illustrate the advantages of the approach, which include real-time online data access and fully redundant, secure storage. Discoveries in biological sciences increasingly require multidisciplinary approaches. With this in mind, Store.Synchrotron has been developed as a component within a greater service that can combine data from other instruments at the Australian Synchrotron, as well as instruments at the Australian neutron source ANSTO. It is therefore envisaged that this will serve as a model implementation of raw data archiving and dissemination within the structural biology research community.
format Online
Article
Text
id pubmed-4187999
institution National Center for Biotechnology Information
language English
publishDate 2014
publisher International Union of Crystallography
record_format MEDLINE/PubMed
spelling pubmed-41879992014-10-24 Operation of the Australian Store.Synchrotron for macromolecular crystallography Meyer, Grischa R. Aragão, David Mudie, Nathan J. Caradoc-Davies, Tom T. McGowan, Sheena Bertling, Philip J. Groenewegen, David Quenette, Stevan M. Bond, Charles S. Buckle, Ashley M. Androulakis, Steve Acta Crystallogr D Biol Crystallogr Diffraction Data Deposition The Store.Synchrotron service, a fully functional, cloud computing-based solution to raw X-ray data archiving and dissemination at the Australian Synchrotron, is described. The service automatically receives and archives raw diffraction data, related metadata and preliminary results of automated data-processing workflows. Data are able to be shared with collaborators and opened to the public. In the nine months since its deployment in August 2013, the service has handled over 22.4 TB of raw data (∼1.7 million diffraction images). Several real examples from the Australian crystallographic community are described that illustrate the advantages of the approach, which include real-time online data access and fully redundant, secure storage. Discoveries in biological sciences increasingly require multidisciplinary approaches. With this in mind, Store.Synchrotron has been developed as a component within a greater service that can combine data from other instruments at the Australian Synchrotron, as well as instruments at the Australian neutron source ANSTO. It is therefore envisaged that this will serve as a model implementation of raw data archiving and dissemination within the structural biology research community. International Union of Crystallography 2014-09-30 /pmc/articles/PMC4187999/ /pubmed/25286837 http://dx.doi.org/10.1107/S1399004714016174 Text en © Meyer et al. 2014 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Diffraction Data Deposition
Meyer, Grischa R.
Aragão, David
Mudie, Nathan J.
Caradoc-Davies, Tom T.
McGowan, Sheena
Bertling, Philip J.
Groenewegen, David
Quenette, Stevan M.
Bond, Charles S.
Buckle, Ashley M.
Androulakis, Steve
Operation of the Australian Store.Synchrotron for macromolecular crystallography
title Operation of the Australian Store.Synchrotron for macromolecular crystallography
title_full Operation of the Australian Store.Synchrotron for macromolecular crystallography
title_fullStr Operation of the Australian Store.Synchrotron for macromolecular crystallography
title_full_unstemmed Operation of the Australian Store.Synchrotron for macromolecular crystallography
title_short Operation of the Australian Store.Synchrotron for macromolecular crystallography
title_sort operation of the australian store.synchrotron for macromolecular crystallography
topic Diffraction Data Deposition
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4187999/
https://www.ncbi.nlm.nih.gov/pubmed/25286837
http://dx.doi.org/10.1107/S1399004714016174
work_keys_str_mv AT meyergrischar operationoftheaustralianstoresynchrotronformacromolecularcrystallography
AT aragaodavid operationoftheaustralianstoresynchrotronformacromolecularcrystallography
AT mudienathanj operationoftheaustralianstoresynchrotronformacromolecularcrystallography
AT caradocdaviestomt operationoftheaustralianstoresynchrotronformacromolecularcrystallography
AT mcgowansheena operationoftheaustralianstoresynchrotronformacromolecularcrystallography
AT bertlingphilipj operationoftheaustralianstoresynchrotronformacromolecularcrystallography
AT groenewegendavid operationoftheaustralianstoresynchrotronformacromolecularcrystallography
AT quenettestevanm operationoftheaustralianstoresynchrotronformacromolecularcrystallography
AT bondcharless operationoftheaustralianstoresynchrotronformacromolecularcrystallography
AT buckleashleym operationoftheaustralianstoresynchrotronformacromolecularcrystallography
AT androulakissteve operationoftheaustralianstoresynchrotronformacromolecularcrystallography