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Operation of the Australian Store.Synchrotron for macromolecular crystallography
The Store.Synchrotron service, a fully functional, cloud computing-based solution to raw X-ray data archiving and dissemination at the Australian Synchrotron, is described. The service automatically receives and archives raw diffraction data, related metadata and preliminary results of automated dat...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4187999/ https://www.ncbi.nlm.nih.gov/pubmed/25286837 http://dx.doi.org/10.1107/S1399004714016174 |
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author | Meyer, Grischa R. Aragão, David Mudie, Nathan J. Caradoc-Davies, Tom T. McGowan, Sheena Bertling, Philip J. Groenewegen, David Quenette, Stevan M. Bond, Charles S. Buckle, Ashley M. Androulakis, Steve |
author_facet | Meyer, Grischa R. Aragão, David Mudie, Nathan J. Caradoc-Davies, Tom T. McGowan, Sheena Bertling, Philip J. Groenewegen, David Quenette, Stevan M. Bond, Charles S. Buckle, Ashley M. Androulakis, Steve |
author_sort | Meyer, Grischa R. |
collection | PubMed |
description | The Store.Synchrotron service, a fully functional, cloud computing-based solution to raw X-ray data archiving and dissemination at the Australian Synchrotron, is described. The service automatically receives and archives raw diffraction data, related metadata and preliminary results of automated data-processing workflows. Data are able to be shared with collaborators and opened to the public. In the nine months since its deployment in August 2013, the service has handled over 22.4 TB of raw data (∼1.7 million diffraction images). Several real examples from the Australian crystallographic community are described that illustrate the advantages of the approach, which include real-time online data access and fully redundant, secure storage. Discoveries in biological sciences increasingly require multidisciplinary approaches. With this in mind, Store.Synchrotron has been developed as a component within a greater service that can combine data from other instruments at the Australian Synchrotron, as well as instruments at the Australian neutron source ANSTO. It is therefore envisaged that this will serve as a model implementation of raw data archiving and dissemination within the structural biology research community. |
format | Online Article Text |
id | pubmed-4187999 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-41879992014-10-24 Operation of the Australian Store.Synchrotron for macromolecular crystallography Meyer, Grischa R. Aragão, David Mudie, Nathan J. Caradoc-Davies, Tom T. McGowan, Sheena Bertling, Philip J. Groenewegen, David Quenette, Stevan M. Bond, Charles S. Buckle, Ashley M. Androulakis, Steve Acta Crystallogr D Biol Crystallogr Diffraction Data Deposition The Store.Synchrotron service, a fully functional, cloud computing-based solution to raw X-ray data archiving and dissemination at the Australian Synchrotron, is described. The service automatically receives and archives raw diffraction data, related metadata and preliminary results of automated data-processing workflows. Data are able to be shared with collaborators and opened to the public. In the nine months since its deployment in August 2013, the service has handled over 22.4 TB of raw data (∼1.7 million diffraction images). Several real examples from the Australian crystallographic community are described that illustrate the advantages of the approach, which include real-time online data access and fully redundant, secure storage. Discoveries in biological sciences increasingly require multidisciplinary approaches. With this in mind, Store.Synchrotron has been developed as a component within a greater service that can combine data from other instruments at the Australian Synchrotron, as well as instruments at the Australian neutron source ANSTO. It is therefore envisaged that this will serve as a model implementation of raw data archiving and dissemination within the structural biology research community. International Union of Crystallography 2014-09-30 /pmc/articles/PMC4187999/ /pubmed/25286837 http://dx.doi.org/10.1107/S1399004714016174 Text en © Meyer et al. 2014 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Diffraction Data Deposition Meyer, Grischa R. Aragão, David Mudie, Nathan J. Caradoc-Davies, Tom T. McGowan, Sheena Bertling, Philip J. Groenewegen, David Quenette, Stevan M. Bond, Charles S. Buckle, Ashley M. Androulakis, Steve Operation of the Australian Store.Synchrotron for macromolecular crystallography |
title | Operation of the Australian Store.Synchrotron for macromolecular crystallography |
title_full | Operation of the Australian Store.Synchrotron for macromolecular crystallography |
title_fullStr | Operation of the Australian Store.Synchrotron for macromolecular crystallography |
title_full_unstemmed | Operation of the Australian Store.Synchrotron for macromolecular crystallography |
title_short | Operation of the Australian Store.Synchrotron for macromolecular crystallography |
title_sort | operation of the australian store.synchrotron for macromolecular crystallography |
topic | Diffraction Data Deposition |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4187999/ https://www.ncbi.nlm.nih.gov/pubmed/25286837 http://dx.doi.org/10.1107/S1399004714016174 |
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