Cargando…
Extremely Elevated Room-Temperature Kinetic Isotope Effects Quantify the Critical Role of Barrier Width in Enzymatic C–H Activation
[Image: see text] The enzyme soybean lipoxygenase (SLO) has served as a prototype for hydrogen-tunneling reactions, as a result of its unusual kinetic isotope effects (KIEs) and their temperature dependencies. Using a synergy of kinetic, structural, and theoretical studies, we show how the interplay...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical
Society
2014
|
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4188422/ https://www.ncbi.nlm.nih.gov/pubmed/24884374 http://dx.doi.org/10.1021/ja502726s |
_version_ | 1782338233060818944 |
---|---|
author | Hu, Shenshen Sharma, Sudhir C. Scouras, Alexander D. Soudackov, Alexander V. Carr, Cody A. Marcus Hammes-Schiffer, Sharon Alber, Tom Klinman, Judith P. |
author_facet | Hu, Shenshen Sharma, Sudhir C. Scouras, Alexander D. Soudackov, Alexander V. Carr, Cody A. Marcus Hammes-Schiffer, Sharon Alber, Tom Klinman, Judith P. |
author_sort | Hu, Shenshen |
collection | PubMed |
description | [Image: see text] The enzyme soybean lipoxygenase (SLO) has served as a prototype for hydrogen-tunneling reactions, as a result of its unusual kinetic isotope effects (KIEs) and their temperature dependencies. Using a synergy of kinetic, structural, and theoretical studies, we show how the interplay between donor–acceptor distance and active-site flexibility leads to catalytic behavior previously predicted by quantum tunneling theory. Modification of the size of two hydrophobic residues by site-specific mutagenesis in SLO reduces the reaction rate 10(4)-fold and is accompanied by an enormous and unprecedented room-temperature KIE. Fitting of the kinetic data to a non-adiabatic model implicates an expansion of the active site that cannot be compensated by donor–acceptor distance sampling. A 1.7 Å resolution X-ray structure of the double mutant further indicates an unaltered backbone conformation, almost identical side-chain conformations, and a significantly enlarged active-site cavity. These findings show the compelling property of room-temperature hydrogen tunneling within a biological context and demonstrate the very high sensitivity of such tunneling to barrier width. |
format | Online Article Text |
id | pubmed-4188422 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | American Chemical
Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-41884222015-06-02 Extremely Elevated Room-Temperature Kinetic Isotope Effects Quantify the Critical Role of Barrier Width in Enzymatic C–H Activation Hu, Shenshen Sharma, Sudhir C. Scouras, Alexander D. Soudackov, Alexander V. Carr, Cody A. Marcus Hammes-Schiffer, Sharon Alber, Tom Klinman, Judith P. J Am Chem Soc [Image: see text] The enzyme soybean lipoxygenase (SLO) has served as a prototype for hydrogen-tunneling reactions, as a result of its unusual kinetic isotope effects (KIEs) and their temperature dependencies. Using a synergy of kinetic, structural, and theoretical studies, we show how the interplay between donor–acceptor distance and active-site flexibility leads to catalytic behavior previously predicted by quantum tunneling theory. Modification of the size of two hydrophobic residues by site-specific mutagenesis in SLO reduces the reaction rate 10(4)-fold and is accompanied by an enormous and unprecedented room-temperature KIE. Fitting of the kinetic data to a non-adiabatic model implicates an expansion of the active site that cannot be compensated by donor–acceptor distance sampling. A 1.7 Å resolution X-ray structure of the double mutant further indicates an unaltered backbone conformation, almost identical side-chain conformations, and a significantly enlarged active-site cavity. These findings show the compelling property of room-temperature hydrogen tunneling within a biological context and demonstrate the very high sensitivity of such tunneling to barrier width. American Chemical Society 2014-06-02 2014-06-11 /pmc/articles/PMC4188422/ /pubmed/24884374 http://dx.doi.org/10.1021/ja502726s Text en Copyright © 2014 American Chemical Society Terms of Use (http://pubs.acs.org/page/policy/authorchoice_termsofuse.html) |
spellingShingle | Hu, Shenshen Sharma, Sudhir C. Scouras, Alexander D. Soudackov, Alexander V. Carr, Cody A. Marcus Hammes-Schiffer, Sharon Alber, Tom Klinman, Judith P. Extremely Elevated Room-Temperature Kinetic Isotope Effects Quantify the Critical Role of Barrier Width in Enzymatic C–H Activation |
title | Extremely
Elevated Room-Temperature Kinetic Isotope
Effects Quantify the Critical Role of Barrier Width in Enzymatic C–H
Activation |
title_full | Extremely
Elevated Room-Temperature Kinetic Isotope
Effects Quantify the Critical Role of Barrier Width in Enzymatic C–H
Activation |
title_fullStr | Extremely
Elevated Room-Temperature Kinetic Isotope
Effects Quantify the Critical Role of Barrier Width in Enzymatic C–H
Activation |
title_full_unstemmed | Extremely
Elevated Room-Temperature Kinetic Isotope
Effects Quantify the Critical Role of Barrier Width in Enzymatic C–H
Activation |
title_short | Extremely
Elevated Room-Temperature Kinetic Isotope
Effects Quantify the Critical Role of Barrier Width in Enzymatic C–H
Activation |
title_sort | extremely
elevated room-temperature kinetic isotope
effects quantify the critical role of barrier width in enzymatic c–h
activation |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4188422/ https://www.ncbi.nlm.nih.gov/pubmed/24884374 http://dx.doi.org/10.1021/ja502726s |
work_keys_str_mv | AT hushenshen extremelyelevatedroomtemperaturekineticisotopeeffectsquantifythecriticalroleofbarrierwidthinenzymaticchactivation AT sharmasudhirc extremelyelevatedroomtemperaturekineticisotopeeffectsquantifythecriticalroleofbarrierwidthinenzymaticchactivation AT scourasalexanderd extremelyelevatedroomtemperaturekineticisotopeeffectsquantifythecriticalroleofbarrierwidthinenzymaticchactivation AT soudackovalexanderv extremelyelevatedroomtemperaturekineticisotopeeffectsquantifythecriticalroleofbarrierwidthinenzymaticchactivation AT carrcodyamarcus extremelyelevatedroomtemperaturekineticisotopeeffectsquantifythecriticalroleofbarrierwidthinenzymaticchactivation AT hammesschiffersharon extremelyelevatedroomtemperaturekineticisotopeeffectsquantifythecriticalroleofbarrierwidthinenzymaticchactivation AT albertom extremelyelevatedroomtemperaturekineticisotopeeffectsquantifythecriticalroleofbarrierwidthinenzymaticchactivation AT klinmanjudithp extremelyelevatedroomtemperaturekineticisotopeeffectsquantifythecriticalroleofbarrierwidthinenzymaticchactivation |