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Locational Diversity of Alpha Satellite DNA and Intergeneric Hybridization Aspects in the Nomascus and Hylobates Genera of Small Apes

Recently, we discovered that alpha satellite DNA has unique and genus-specific localizations on the chromosomes of small apes. This study describes the details of alpha satellite localization in the genera Nomascus and Hylobates and explores their usefulness in distinguishing parental genome sets in...

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Autores principales: Baicharoen, Sudarath, Miyabe-Nishiwaki, Takako, Arsaithamkul, Visit, Hirai, Yuriko, Duangsa-ard, Kwanruen, Siriaroonrat, Boripat, Domae, Hiroshi, Srikulnath, Kornsorn, Koga, Akihiko, Hirai, Hirohisa
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4188616/
https://www.ncbi.nlm.nih.gov/pubmed/25290445
http://dx.doi.org/10.1371/journal.pone.0109151
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author Baicharoen, Sudarath
Miyabe-Nishiwaki, Takako
Arsaithamkul, Visit
Hirai, Yuriko
Duangsa-ard, Kwanruen
Siriaroonrat, Boripat
Domae, Hiroshi
Srikulnath, Kornsorn
Koga, Akihiko
Hirai, Hirohisa
author_facet Baicharoen, Sudarath
Miyabe-Nishiwaki, Takako
Arsaithamkul, Visit
Hirai, Yuriko
Duangsa-ard, Kwanruen
Siriaroonrat, Boripat
Domae, Hiroshi
Srikulnath, Kornsorn
Koga, Akihiko
Hirai, Hirohisa
author_sort Baicharoen, Sudarath
collection PubMed
description Recently, we discovered that alpha satellite DNA has unique and genus-specific localizations on the chromosomes of small apes. This study describes the details of alpha satellite localization in the genera Nomascus and Hylobates and explores their usefulness in distinguishing parental genome sets in hybrids between these genera. Fluorescence in situ hybridization was used to establish diagnostic criteria of alpha satellite DNA markers in discriminating small ape genomes. In particular we established the genus specificity of alpha satellite distribution in three species of light-cheeked gibbons (Nomascus leucogenys, N. siki, and N. gabriellae) in comparison to that of Hylobates lar. Then we determined the localization of alpha satellite DNA in a hybrid individual which resulted from a cross between these two genera. In Nomascus the alpha satellite DNA blocks were located at the centromere, telomere, and four interstitial regions. In Hylobates detectable amounts of alpha satellite DNA were seen only at centromeric regions. The differences in alpha satellite DNA locations between Nomascus and Hylobates allowed us to easily distinguish the parental chromosomal sets in the genome of intergeneric hybrid individuals found in Thai and Japanese zoos. Our study illustrates how molecular cytogenetic markers can serve as diagnostic tools to identify the origin of individuals. These molecular tools can aid zoos, captive breeding programs and conservation efforts in managing small apes species. Discovering more information on alpha satellite distribution is also an opportunity to examine phylogenetic and evolutionary questions that are still controversial in small apes.
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spelling pubmed-41886162014-10-10 Locational Diversity of Alpha Satellite DNA and Intergeneric Hybridization Aspects in the Nomascus and Hylobates Genera of Small Apes Baicharoen, Sudarath Miyabe-Nishiwaki, Takako Arsaithamkul, Visit Hirai, Yuriko Duangsa-ard, Kwanruen Siriaroonrat, Boripat Domae, Hiroshi Srikulnath, Kornsorn Koga, Akihiko Hirai, Hirohisa PLoS One Research Article Recently, we discovered that alpha satellite DNA has unique and genus-specific localizations on the chromosomes of small apes. This study describes the details of alpha satellite localization in the genera Nomascus and Hylobates and explores their usefulness in distinguishing parental genome sets in hybrids between these genera. Fluorescence in situ hybridization was used to establish diagnostic criteria of alpha satellite DNA markers in discriminating small ape genomes. In particular we established the genus specificity of alpha satellite distribution in three species of light-cheeked gibbons (Nomascus leucogenys, N. siki, and N. gabriellae) in comparison to that of Hylobates lar. Then we determined the localization of alpha satellite DNA in a hybrid individual which resulted from a cross between these two genera. In Nomascus the alpha satellite DNA blocks were located at the centromere, telomere, and four interstitial regions. In Hylobates detectable amounts of alpha satellite DNA were seen only at centromeric regions. The differences in alpha satellite DNA locations between Nomascus and Hylobates allowed us to easily distinguish the parental chromosomal sets in the genome of intergeneric hybrid individuals found in Thai and Japanese zoos. Our study illustrates how molecular cytogenetic markers can serve as diagnostic tools to identify the origin of individuals. These molecular tools can aid zoos, captive breeding programs and conservation efforts in managing small apes species. Discovering more information on alpha satellite distribution is also an opportunity to examine phylogenetic and evolutionary questions that are still controversial in small apes. Public Library of Science 2014-10-07 /pmc/articles/PMC4188616/ /pubmed/25290445 http://dx.doi.org/10.1371/journal.pone.0109151 Text en © 2014 Baicharoen et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Baicharoen, Sudarath
Miyabe-Nishiwaki, Takako
Arsaithamkul, Visit
Hirai, Yuriko
Duangsa-ard, Kwanruen
Siriaroonrat, Boripat
Domae, Hiroshi
Srikulnath, Kornsorn
Koga, Akihiko
Hirai, Hirohisa
Locational Diversity of Alpha Satellite DNA and Intergeneric Hybridization Aspects in the Nomascus and Hylobates Genera of Small Apes
title Locational Diversity of Alpha Satellite DNA and Intergeneric Hybridization Aspects in the Nomascus and Hylobates Genera of Small Apes
title_full Locational Diversity of Alpha Satellite DNA and Intergeneric Hybridization Aspects in the Nomascus and Hylobates Genera of Small Apes
title_fullStr Locational Diversity of Alpha Satellite DNA and Intergeneric Hybridization Aspects in the Nomascus and Hylobates Genera of Small Apes
title_full_unstemmed Locational Diversity of Alpha Satellite DNA and Intergeneric Hybridization Aspects in the Nomascus and Hylobates Genera of Small Apes
title_short Locational Diversity of Alpha Satellite DNA and Intergeneric Hybridization Aspects in the Nomascus and Hylobates Genera of Small Apes
title_sort locational diversity of alpha satellite dna and intergeneric hybridization aspects in the nomascus and hylobates genera of small apes
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4188616/
https://www.ncbi.nlm.nih.gov/pubmed/25290445
http://dx.doi.org/10.1371/journal.pone.0109151
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