Cargando…

Interactions of the yeast mitochondrial RNA polymerase with the +1 and +2 promoter bases dictate transcription initiation efficiency

Mitochondrial promoters of Saccharomyces cerevisiae share a conserved −8 to +1 sequence with +1+2 AA, AG or AT initiation sequence, which dictates the efficiency of transcription initiation by the mitochondrial RNA polymerase Rpo41 and its initiation factor Mtf1. We used 2-aminopurine fluorescence t...

Descripción completa

Detalles Bibliográficos
Autores principales:	Deshpande, Aishwarya P., Patel, Smita S.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2014
Materias:	Nucleic Acid Enzymes
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4191429/ https://www.ncbi.nlm.nih.gov/pubmed/25249624 http://dx.doi.org/10.1093/nar/gku868

Ejemplares similares

The C-terminal tail of the yeast mitochondrial transcription factor Mtf1 coordinates template strand alignment, DNA scrunching and timely transition into elongation
por: Basu, Urmimala, et al.
Publicado: (2020)

Human mitochondrial transcription factors TFAM and TFB2M work synergistically in promoter melting during transcription initiation
por: Ramachandran, Aparna, et al.
Publicado: (2017)

Opening–closing dynamics of the mitochondrial transcription pre-initiation complex
por: Kim, Hajin, et al.
Publicado: (2012)

Identification and characterization of the mitochondrial RNA polymerase and transcription factor in the fission yeast Schizosaccharomyces pombe
por: Jiang, Hengyi, et al.
Publicado: (2011)

A novel intermediate in transcription initiation by human mitochondrial RNA polymerase
por: Morozov, Yaroslav I., et al.
Publicado: (2014)

Transcription-independent role for human mitochondrial RNA polymerase in mitochondrial ribosome biogenesis
por: Surovtseva, Yulia V., et al.
Publicado: (2013)

Multiple roles of the RNA polymerase β′ SW2 region in transcription initiation, promoter escape, and RNA elongation
por: Pupov, Danil, et al.
Publicado: (2010)

The omega subunit of the RNA polymerase core directs transcription efficiency in cyanobacteria
por: Gunnelius, Liisa, et al.
Publicado: (2014)

Cloning of the sea urchin mitochondrial RNA polymerase and reconstitution of the transcription termination system
por: Polosa, Paola Loguercio, et al.
Publicado: (2007)

Site specific phosphorylation of yeast RNA polymerase I
por: Gerber, Jochen, et al.
Publicado: (2008)

Structure–function analysis of the RNA polymerase cleft loops elucidates initial transcription, DNA unwinding and RNA displacement
por: Naji, Souad, et al.
Publicado: (2008)

The methyltransferase domain of dengue virus protein NS5 ensures efficient RNA synthesis initiation and elongation by the polymerase domain
por: Potisopon, Supanee, et al.
Publicado: (2014)

Functional organization of the Rpb5 subunit shared by the three yeast RNA polymerases
por: Zaros, Cécile, et al.
Publicado: (2007)

The fidelity of DNA synthesis by yeast DNA polymerase zeta alone and with accessory proteins
por: Zhong, Xuejun, et al.
Publicado: (2006)

A highly conserved Tyrosine residue of family B DNA polymerases contributes to dictate translesion synthesis past 8-oxo-7,8-dihydro-2′-deoxyguanosine
por: de Vega, Miguel, et al.
Publicado: (2007)

RPA and PCNA suppress formation of large deletion errors by yeast DNA polymerase δ
por: Fortune, John M., et al.
Publicado: (2006)

Regulation of yeast DNA polymerase δ-mediated strand displacement synthesis by 5′-flaps
por: Koc, Katrina N., et al.
Publicado: (2015)

Oxidative damage diminishes mitochondrial DNA polymerase replication fidelity
por: Anderson, Andrew P, et al.
Publicado: (2020)

Impact of template backbone heterogeneity on RNA polymerase II transcription
por: Xu, Liang, et al.
Publicado: (2015)

Ribonucleotides embedded in template DNA impair mitochondrial RNA polymerase progression
por: Singh, Meenakshi, et al.
Publicado: (2022)

Mechanisms of template handling and pseudoknot folding in human telomerase and their manipulation to expand the sequence repertoire of processive repeat synthesis
por: Deshpande, Aishwarya P, et al.
Publicado: (2018)

An in vitro fluorescence based study of initiation of RNA synthesis by influenza B polymerase
por: Reich, Stefan, et al.
Publicado: (2017)

The accessory subunit B of DNA polymerase γ is required for mitochondrial replisome function
por: Farge, Géraldine, et al.
Publicado: (2007)

A novel mechanism of selectivity against AZT by the human mitochondrial DNA polymerase
por: Hanes, Jeremiah W., et al.
Publicado: (2007)

Substitution of a residue contacting the triphosphate moiety of the incoming nucleotide increases the fidelity of yeast DNA polymerase ζ
por: Howell, Craig A., et al.
Publicado: (2008)

Negative regulation of mitochondrial transcription by mitochondrial topoisomerase I
por: Sobek, Stefan, et al.
Publicado: (2013)

Engineering human PrimPol into an efficient RNA-dependent-DNA primase/polymerase
por: Agudo, Rubén, et al.
Publicado: (2017)

The RNA polymerase trigger loop functions in all three phases of the transcription cycle
por: Fouqueau, Thomas, et al.
Publicado: (2013)

Five checkpoints maintaining the fidelity of transcription by RNA polymerases in structural and energetic details
por: Wang, Beibei, et al.
Publicado: (2015)

The effect of macromolecular crowding on single-round transcription by Escherichia coli RNA polymerase
por: Chung, SangYoon, et al.
Publicado: (2019)

AID–RNA polymerase II transcription-dependent deamination of IgV DNA
por: Pham, Phuong, et al.
Publicado: (2019)

Subgenomic promoter recognition by the norovirus RNA-dependent RNA polymerases
por: Lin, Xiaoyan, et al.
Publicado: (2015)

Bacteriophage λ N protein inhibits transcription slippage by Escherichia coli RNA polymerase
por: Parks, Adam R., et al.
Publicado: (2014)

Deoxyuridine in DNA has an inhibitory and promutagenic effect on RNA transcription by diverse RNA polymerases
por: Cui, Junru, et al.
Publicado: (2019)

Indirect read-out of the promoter DNA by RNA polymerase in the closed complex
por: Debnath, Subrata, et al.
Publicado: (2013)

RNA–DNA and DNA–DNA base-pairing at the upstream edge of the transcription bubble regulate translocation of RNA polymerase and transcription rate
por: KIreeva, Maria, et al.
Publicado: (2018)

Regulation of B family DNA polymerase fidelity by a conserved active site residue: characterization of M644W, M644L and M644F mutants of yeast DNA polymerase ε
por: Pursell, Zachary F., et al.
Publicado: (2007)

Backtracking behavior in viral RNA-dependent RNA polymerase provides the basis for a second initiation site
por: Dulin, David, et al.
Publicado: (2015)

An induced-fit de novo initiation mechanism suggested by a pestivirus RNA-dependent RNA polymerase
por: Zhang, Bu-Yu, et al.
Publicado: (2021)

Controlling the motor activity of a transcription-repair coupling factor: autoinhibition and the role of RNA polymerase
por: Smith, Abigail J., et al.
Publicado: (2007)

Cannot write session to /tmp/vufind_sessions/sess_tnncdm27fpqm46j25ak07d44nt