Cargando…

Micro-Plasticity of Genomes As Illustrated by the Evolution of Glutathione Transferases in 12 Drosophila Species

Glutathione transferases (GST) are an ancient superfamily comprising a large number of paralogous proteins in a single organism. This multiplicity of GSTs has allowed the copies to diverge for neofunctionalization with proposed roles ranging from detoxication and oxidative stress response to involve...

Descripción completa

Detalles Bibliográficos
Autores principales: Saisawang, Chonticha, Ketterman, Albert J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4195677/
https://www.ncbi.nlm.nih.gov/pubmed/25310450
http://dx.doi.org/10.1371/journal.pone.0109518
_version_ 1782339343807938560
author Saisawang, Chonticha
Ketterman, Albert J.
author_facet Saisawang, Chonticha
Ketterman, Albert J.
author_sort Saisawang, Chonticha
collection PubMed
description Glutathione transferases (GST) are an ancient superfamily comprising a large number of paralogous proteins in a single organism. This multiplicity of GSTs has allowed the copies to diverge for neofunctionalization with proposed roles ranging from detoxication and oxidative stress response to involvement in signal transduction cascades. We performed a comparative genomic analysis using FlyBase annotations and Drosophila melanogaster GST sequences as templates to further annotate the GST orthologs in the 12 Drosophila sequenced genomes. We found that GST genes in the Drosophila subgenera have undergone repeated local duplications followed by transposition, inversion, and micro-rearrangements of these copies. The colinearity and orientations of the orthologous GST genes appear to be unique in many of the species which suggests that genomic rearrangement events have occurred multiple times during speciation. The high micro-plasticity of the genomes appears to have a functional contribution utilized for evolution of this gene family.
format Online
Article
Text
id pubmed-4195677
institution National Center for Biotechnology Information
language English
publishDate 2014
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-41956772014-10-15 Micro-Plasticity of Genomes As Illustrated by the Evolution of Glutathione Transferases in 12 Drosophila Species Saisawang, Chonticha Ketterman, Albert J. PLoS One Research Article Glutathione transferases (GST) are an ancient superfamily comprising a large number of paralogous proteins in a single organism. This multiplicity of GSTs has allowed the copies to diverge for neofunctionalization with proposed roles ranging from detoxication and oxidative stress response to involvement in signal transduction cascades. We performed a comparative genomic analysis using FlyBase annotations and Drosophila melanogaster GST sequences as templates to further annotate the GST orthologs in the 12 Drosophila sequenced genomes. We found that GST genes in the Drosophila subgenera have undergone repeated local duplications followed by transposition, inversion, and micro-rearrangements of these copies. The colinearity and orientations of the orthologous GST genes appear to be unique in many of the species which suggests that genomic rearrangement events have occurred multiple times during speciation. The high micro-plasticity of the genomes appears to have a functional contribution utilized for evolution of this gene family. Public Library of Science 2014-10-13 /pmc/articles/PMC4195677/ /pubmed/25310450 http://dx.doi.org/10.1371/journal.pone.0109518 Text en © 2014 Saisawang, Ketterman http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Saisawang, Chonticha
Ketterman, Albert J.
Micro-Plasticity of Genomes As Illustrated by the Evolution of Glutathione Transferases in 12 Drosophila Species
title Micro-Plasticity of Genomes As Illustrated by the Evolution of Glutathione Transferases in 12 Drosophila Species
title_full Micro-Plasticity of Genomes As Illustrated by the Evolution of Glutathione Transferases in 12 Drosophila Species
title_fullStr Micro-Plasticity of Genomes As Illustrated by the Evolution of Glutathione Transferases in 12 Drosophila Species
title_full_unstemmed Micro-Plasticity of Genomes As Illustrated by the Evolution of Glutathione Transferases in 12 Drosophila Species
title_short Micro-Plasticity of Genomes As Illustrated by the Evolution of Glutathione Transferases in 12 Drosophila Species
title_sort micro-plasticity of genomes as illustrated by the evolution of glutathione transferases in 12 drosophila species
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4195677/
https://www.ncbi.nlm.nih.gov/pubmed/25310450
http://dx.doi.org/10.1371/journal.pone.0109518
work_keys_str_mv AT saisawangchonticha microplasticityofgenomesasillustratedbytheevolutionofglutathionetransferasesin12drosophilaspecies
AT kettermanalbertj microplasticityofgenomesasillustratedbytheevolutionofglutathionetransferasesin12drosophilaspecies