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Detection of the G17V RHOA Mutation in Angioimmunoblastic T-Cell Lymphoma and Related Lymphomas Using Quantitative Allele-Specific PCR
Angioimmunoblastic T-cell lymphoma (AITL) and peripheral T-cell lymphoma, not otherwise specified (PTCL-NOS) are subtypes of T-cell lymphoma. Due to low tumor cell content and substantial reactive cell infiltration, these lymphomas are sometimes mistaken for other types of lymphomas or even non-neop...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4195681/ https://www.ncbi.nlm.nih.gov/pubmed/25310466 http://dx.doi.org/10.1371/journal.pone.0109714 |
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author | Nakamoto-Matsubara, Rie Sakata-Yanagimoto, Mamiko Enami, Terukazu Yoshida, Kenichi Yanagimoto, Shintaro Shiozawa, Yusuke Nanmoku, Tohru Satomi, Kaishi Muto, Hideharu Obara, Naoshi Kato, Takayasu Kurita, Naoki Yokoyama, Yasuhisa Izutsu, Koji Ota, Yasunori Sanada, Masashi Shimizu, Seiichi Komeno, Takuya Sato, Yuji Ito, Takayoshi Kitabayashi, Issay Takeuchi, Kengo Nakamura, Naoya Ogawa, Seishi Chiba, Shigeru |
author_facet | Nakamoto-Matsubara, Rie Sakata-Yanagimoto, Mamiko Enami, Terukazu Yoshida, Kenichi Yanagimoto, Shintaro Shiozawa, Yusuke Nanmoku, Tohru Satomi, Kaishi Muto, Hideharu Obara, Naoshi Kato, Takayasu Kurita, Naoki Yokoyama, Yasuhisa Izutsu, Koji Ota, Yasunori Sanada, Masashi Shimizu, Seiichi Komeno, Takuya Sato, Yuji Ito, Takayoshi Kitabayashi, Issay Takeuchi, Kengo Nakamura, Naoya Ogawa, Seishi Chiba, Shigeru |
author_sort | Nakamoto-Matsubara, Rie |
collection | PubMed |
description | Angioimmunoblastic T-cell lymphoma (AITL) and peripheral T-cell lymphoma, not otherwise specified (PTCL-NOS) are subtypes of T-cell lymphoma. Due to low tumor cell content and substantial reactive cell infiltration, these lymphomas are sometimes mistaken for other types of lymphomas or even non-neoplastic diseases. In addition, a significant proportion of PTCL-NOS cases reportedly exhibit features of AITL (AITL-like PTCL-NOS). Thus disagreement is common in distinguishing between AITL and PTCL-NOS. Using whole-exome and subsequent targeted sequencing, we recently identified G17V RHOA mutations in 60–70% of AITL and AITL-like PTCL-NOS cases but not in other hematologic cancers, including other T-cell malignancies. Here, we establish a sensitive detection method for the G17V RHOA mutation using a quantitative allele-specific polymerase chain reaction (qAS-PCR) assay. Mutated allele frequencies deduced from this approach were highly correlated with those determined by deep sequencing. This method could serve as a novel diagnostic tool for 60–70% of AITL and AITL-like PTCL-NOS. |
format | Online Article Text |
id | pubmed-4195681 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-41956812014-10-15 Detection of the G17V RHOA Mutation in Angioimmunoblastic T-Cell Lymphoma and Related Lymphomas Using Quantitative Allele-Specific PCR Nakamoto-Matsubara, Rie Sakata-Yanagimoto, Mamiko Enami, Terukazu Yoshida, Kenichi Yanagimoto, Shintaro Shiozawa, Yusuke Nanmoku, Tohru Satomi, Kaishi Muto, Hideharu Obara, Naoshi Kato, Takayasu Kurita, Naoki Yokoyama, Yasuhisa Izutsu, Koji Ota, Yasunori Sanada, Masashi Shimizu, Seiichi Komeno, Takuya Sato, Yuji Ito, Takayoshi Kitabayashi, Issay Takeuchi, Kengo Nakamura, Naoya Ogawa, Seishi Chiba, Shigeru PLoS One Research Article Angioimmunoblastic T-cell lymphoma (AITL) and peripheral T-cell lymphoma, not otherwise specified (PTCL-NOS) are subtypes of T-cell lymphoma. Due to low tumor cell content and substantial reactive cell infiltration, these lymphomas are sometimes mistaken for other types of lymphomas or even non-neoplastic diseases. In addition, a significant proportion of PTCL-NOS cases reportedly exhibit features of AITL (AITL-like PTCL-NOS). Thus disagreement is common in distinguishing between AITL and PTCL-NOS. Using whole-exome and subsequent targeted sequencing, we recently identified G17V RHOA mutations in 60–70% of AITL and AITL-like PTCL-NOS cases but not in other hematologic cancers, including other T-cell malignancies. Here, we establish a sensitive detection method for the G17V RHOA mutation using a quantitative allele-specific polymerase chain reaction (qAS-PCR) assay. Mutated allele frequencies deduced from this approach were highly correlated with those determined by deep sequencing. This method could serve as a novel diagnostic tool for 60–70% of AITL and AITL-like PTCL-NOS. Public Library of Science 2014-10-13 /pmc/articles/PMC4195681/ /pubmed/25310466 http://dx.doi.org/10.1371/journal.pone.0109714 Text en © 2014 Nakamoto-Matsubara et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Nakamoto-Matsubara, Rie Sakata-Yanagimoto, Mamiko Enami, Terukazu Yoshida, Kenichi Yanagimoto, Shintaro Shiozawa, Yusuke Nanmoku, Tohru Satomi, Kaishi Muto, Hideharu Obara, Naoshi Kato, Takayasu Kurita, Naoki Yokoyama, Yasuhisa Izutsu, Koji Ota, Yasunori Sanada, Masashi Shimizu, Seiichi Komeno, Takuya Sato, Yuji Ito, Takayoshi Kitabayashi, Issay Takeuchi, Kengo Nakamura, Naoya Ogawa, Seishi Chiba, Shigeru Detection of the G17V RHOA Mutation in Angioimmunoblastic T-Cell Lymphoma and Related Lymphomas Using Quantitative Allele-Specific PCR |
title | Detection of the G17V RHOA Mutation in Angioimmunoblastic T-Cell Lymphoma and Related Lymphomas Using Quantitative Allele-Specific PCR |
title_full | Detection of the G17V RHOA Mutation in Angioimmunoblastic T-Cell Lymphoma and Related Lymphomas Using Quantitative Allele-Specific PCR |
title_fullStr | Detection of the G17V RHOA Mutation in Angioimmunoblastic T-Cell Lymphoma and Related Lymphomas Using Quantitative Allele-Specific PCR |
title_full_unstemmed | Detection of the G17V RHOA Mutation in Angioimmunoblastic T-Cell Lymphoma and Related Lymphomas Using Quantitative Allele-Specific PCR |
title_short | Detection of the G17V RHOA Mutation in Angioimmunoblastic T-Cell Lymphoma and Related Lymphomas Using Quantitative Allele-Specific PCR |
title_sort | detection of the g17v rhoa mutation in angioimmunoblastic t-cell lymphoma and related lymphomas using quantitative allele-specific pcr |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4195681/ https://www.ncbi.nlm.nih.gov/pubmed/25310466 http://dx.doi.org/10.1371/journal.pone.0109714 |
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