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Structural Characteristic of the Initial Unfolded State on Refolding Determines Catalytic Efficiency of the Folded Protein in Presence of Osmolytes

Osmolytes are low molecular weight organic molecules accumulated by organisms to assist proper protein folding, and to provide protection to the structural integrity of proteins under denaturing stress conditions. It is known that osmolyte-induced protein folding is brought by unfavorable interactio...

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Autores principales: Warepam, Marina, Sharma, Gurumayum Suraj, Dar, Tanveer Ali, Khan, Md. Khurshid Alam, Singh, Laishram Rajendrakumar
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4196897/
https://www.ncbi.nlm.nih.gov/pubmed/25313668
http://dx.doi.org/10.1371/journal.pone.0109408
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author Warepam, Marina
Sharma, Gurumayum Suraj
Dar, Tanveer Ali
Khan, Md. Khurshid Alam
Singh, Laishram Rajendrakumar
author_facet Warepam, Marina
Sharma, Gurumayum Suraj
Dar, Tanveer Ali
Khan, Md. Khurshid Alam
Singh, Laishram Rajendrakumar
author_sort Warepam, Marina
collection PubMed
description Osmolytes are low molecular weight organic molecules accumulated by organisms to assist proper protein folding, and to provide protection to the structural integrity of proteins under denaturing stress conditions. It is known that osmolyte-induced protein folding is brought by unfavorable interaction of osmolytes with the denatured/unfolded states. The interaction of osmolyte with the native state does not significantly contribute to the osmolyte-induced protein folding. We have therefore investigated if different denatured states of a protein (generated by different denaturing agents) interact differently with the osmolytes to induce protein folding. We observed that osmolyte-assisted refolding of protein obtained from heat-induced denatured state produces native molecules with higher enzyme activity than those initiated from GdmCl- or urea-induced denatured state indicating that the structural property of the initial denatured state during refolding by osmolytes determines the catalytic efficiency of the folded protein molecule. These conclusions have been reached from the systematic measurements of enzymatic kinetic parameters (K (m) and k (cat)), thermodynamic stability (T (m) and ΔH (m)) and secondary and tertiary structures of the folded native proteins obtained from refolding of various denatured states (due to heat-, urea- and GdmCl-induced denaturation) of RNase-A in the presence of various osmolytes.
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spelling pubmed-41968972014-10-16 Structural Characteristic of the Initial Unfolded State on Refolding Determines Catalytic Efficiency of the Folded Protein in Presence of Osmolytes Warepam, Marina Sharma, Gurumayum Suraj Dar, Tanveer Ali Khan, Md. Khurshid Alam Singh, Laishram Rajendrakumar PLoS One Research Article Osmolytes are low molecular weight organic molecules accumulated by organisms to assist proper protein folding, and to provide protection to the structural integrity of proteins under denaturing stress conditions. It is known that osmolyte-induced protein folding is brought by unfavorable interaction of osmolytes with the denatured/unfolded states. The interaction of osmolyte with the native state does not significantly contribute to the osmolyte-induced protein folding. We have therefore investigated if different denatured states of a protein (generated by different denaturing agents) interact differently with the osmolytes to induce protein folding. We observed that osmolyte-assisted refolding of protein obtained from heat-induced denatured state produces native molecules with higher enzyme activity than those initiated from GdmCl- or urea-induced denatured state indicating that the structural property of the initial denatured state during refolding by osmolytes determines the catalytic efficiency of the folded protein molecule. These conclusions have been reached from the systematic measurements of enzymatic kinetic parameters (K (m) and k (cat)), thermodynamic stability (T (m) and ΔH (m)) and secondary and tertiary structures of the folded native proteins obtained from refolding of various denatured states (due to heat-, urea- and GdmCl-induced denaturation) of RNase-A in the presence of various osmolytes. Public Library of Science 2014-10-14 /pmc/articles/PMC4196897/ /pubmed/25313668 http://dx.doi.org/10.1371/journal.pone.0109408 Text en © 2014 Warepam et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Warepam, Marina
Sharma, Gurumayum Suraj
Dar, Tanveer Ali
Khan, Md. Khurshid Alam
Singh, Laishram Rajendrakumar
Structural Characteristic of the Initial Unfolded State on Refolding Determines Catalytic Efficiency of the Folded Protein in Presence of Osmolytes
title Structural Characteristic of the Initial Unfolded State on Refolding Determines Catalytic Efficiency of the Folded Protein in Presence of Osmolytes
title_full Structural Characteristic of the Initial Unfolded State on Refolding Determines Catalytic Efficiency of the Folded Protein in Presence of Osmolytes
title_fullStr Structural Characteristic of the Initial Unfolded State on Refolding Determines Catalytic Efficiency of the Folded Protein in Presence of Osmolytes
title_full_unstemmed Structural Characteristic of the Initial Unfolded State on Refolding Determines Catalytic Efficiency of the Folded Protein in Presence of Osmolytes
title_short Structural Characteristic of the Initial Unfolded State on Refolding Determines Catalytic Efficiency of the Folded Protein in Presence of Osmolytes
title_sort structural characteristic of the initial unfolded state on refolding determines catalytic efficiency of the folded protein in presence of osmolytes
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4196897/
https://www.ncbi.nlm.nih.gov/pubmed/25313668
http://dx.doi.org/10.1371/journal.pone.0109408
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