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High-resolution NMR studies of structure and dynamics of human ERp27 indicate extensive interdomain flexibility

ERp27 (endoplasmic reticulum protein 27.7 kDa) is a homologue of PDI (protein disulfide-isomerase) localized to the endoplasmic reticulum. ERp27 is predicted to consist of two thioredoxin-fold domains homologous with the non-catalytic b and b′ domains of PDI. The structure in solution of the N-termi...

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Autores principales: Amin, Nader T., Wallis, A. Katrine, Wells, Stephen A., Rowe, Michelle L., Williamson, Richard A., Howard, Mark J., Freedman, Robert B.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Portland Press Ltd. 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4203274/
https://www.ncbi.nlm.nih.gov/pubmed/23234573
http://dx.doi.org/10.1042/BJ20121635
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author Amin, Nader T.
Wallis, A. Katrine
Wells, Stephen A.
Rowe, Michelle L.
Williamson, Richard A.
Howard, Mark J.
Freedman, Robert B.
author_facet Amin, Nader T.
Wallis, A. Katrine
Wells, Stephen A.
Rowe, Michelle L.
Williamson, Richard A.
Howard, Mark J.
Freedman, Robert B.
author_sort Amin, Nader T.
collection PubMed
description ERp27 (endoplasmic reticulum protein 27.7 kDa) is a homologue of PDI (protein disulfide-isomerase) localized to the endoplasmic reticulum. ERp27 is predicted to consist of two thioredoxin-fold domains homologous with the non-catalytic b and b′ domains of PDI. The structure in solution of the N-terminal b-like domain of ERp27 was solved using high-resolution NMR data. The structure confirms that it has the thioredoxin fold and that ERp27 is a member of the PDI family. (15)N-NMR relaxation data were obtained and ModelFree analysis highlighted limited exchange contributions and slow internal motions, and indicated that the domain has an average order parameter S(2) of 0.79. Comparison of the single-domain structure determined in the present study with the equivalent domain within full-length ERp27, determined independently by X-ray diffraction, indicated very close agreement. The domain interface inferred from NMR data in solution was much more extensive than that observed in the X-ray structure, suggesting that the domains flex independently and that crystallization selects one specific interdomain orientation. This led us to apply a new rapid method to simulate the flexibility of the full-length protein, establishing that the domains show considerable freedom to flex (tilt and twist) about the interdomain linker, consistent with the NMR data.
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spelling pubmed-42032742014-10-21 High-resolution NMR studies of structure and dynamics of human ERp27 indicate extensive interdomain flexibility Amin, Nader T. Wallis, A. Katrine Wells, Stephen A. Rowe, Michelle L. Williamson, Richard A. Howard, Mark J. Freedman, Robert B. Biochem J Research Article ERp27 (endoplasmic reticulum protein 27.7 kDa) is a homologue of PDI (protein disulfide-isomerase) localized to the endoplasmic reticulum. ERp27 is predicted to consist of two thioredoxin-fold domains homologous with the non-catalytic b and b′ domains of PDI. The structure in solution of the N-terminal b-like domain of ERp27 was solved using high-resolution NMR data. The structure confirms that it has the thioredoxin fold and that ERp27 is a member of the PDI family. (15)N-NMR relaxation data were obtained and ModelFree analysis highlighted limited exchange contributions and slow internal motions, and indicated that the domain has an average order parameter S(2) of 0.79. Comparison of the single-domain structure determined in the present study with the equivalent domain within full-length ERp27, determined independently by X-ray diffraction, indicated very close agreement. The domain interface inferred from NMR data in solution was much more extensive than that observed in the X-ray structure, suggesting that the domains flex independently and that crystallization selects one specific interdomain orientation. This led us to apply a new rapid method to simulate the flexibility of the full-length protein, establishing that the domains show considerable freedom to flex (tilt and twist) about the interdomain linker, consistent with the NMR data. Portland Press Ltd. 2013-02-15 2013-03-01 /pmc/articles/PMC4203274/ /pubmed/23234573 http://dx.doi.org/10.1042/BJ20121635 Text en © 2013 The Author(s) The author(s) has paid for this article to be freely available under the terms of the Creative Commons Attribution Non-Commercial Licence (http://creativecommons.org/licenses/by-nc/2.5/) which permits unrestricted non-commercial use, distribution and reproduction in any medium, provided the original work is properly cited. http://creativecommons.org/licenses/by-nc/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Amin, Nader T.
Wallis, A. Katrine
Wells, Stephen A.
Rowe, Michelle L.
Williamson, Richard A.
Howard, Mark J.
Freedman, Robert B.
High-resolution NMR studies of structure and dynamics of human ERp27 indicate extensive interdomain flexibility
title High-resolution NMR studies of structure and dynamics of human ERp27 indicate extensive interdomain flexibility
title_full High-resolution NMR studies of structure and dynamics of human ERp27 indicate extensive interdomain flexibility
title_fullStr High-resolution NMR studies of structure and dynamics of human ERp27 indicate extensive interdomain flexibility
title_full_unstemmed High-resolution NMR studies of structure and dynamics of human ERp27 indicate extensive interdomain flexibility
title_short High-resolution NMR studies of structure and dynamics of human ERp27 indicate extensive interdomain flexibility
title_sort high-resolution nmr studies of structure and dynamics of human erp27 indicate extensive interdomain flexibility
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4203274/
https://www.ncbi.nlm.nih.gov/pubmed/23234573
http://dx.doi.org/10.1042/BJ20121635
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