Cargando…
High-resolution NMR studies of structure and dynamics of human ERp27 indicate extensive interdomain flexibility
ERp27 (endoplasmic reticulum protein 27.7 kDa) is a homologue of PDI (protein disulfide-isomerase) localized to the endoplasmic reticulum. ERp27 is predicted to consist of two thioredoxin-fold domains homologous with the non-catalytic b and b′ domains of PDI. The structure in solution of the N-termi...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Portland Press Ltd.
2013
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4203274/ https://www.ncbi.nlm.nih.gov/pubmed/23234573 http://dx.doi.org/10.1042/BJ20121635 |
_version_ | 1782340381414785024 |
---|---|
author | Amin, Nader T. Wallis, A. Katrine Wells, Stephen A. Rowe, Michelle L. Williamson, Richard A. Howard, Mark J. Freedman, Robert B. |
author_facet | Amin, Nader T. Wallis, A. Katrine Wells, Stephen A. Rowe, Michelle L. Williamson, Richard A. Howard, Mark J. Freedman, Robert B. |
author_sort | Amin, Nader T. |
collection | PubMed |
description | ERp27 (endoplasmic reticulum protein 27.7 kDa) is a homologue of PDI (protein disulfide-isomerase) localized to the endoplasmic reticulum. ERp27 is predicted to consist of two thioredoxin-fold domains homologous with the non-catalytic b and b′ domains of PDI. The structure in solution of the N-terminal b-like domain of ERp27 was solved using high-resolution NMR data. The structure confirms that it has the thioredoxin fold and that ERp27 is a member of the PDI family. (15)N-NMR relaxation data were obtained and ModelFree analysis highlighted limited exchange contributions and slow internal motions, and indicated that the domain has an average order parameter S(2) of 0.79. Comparison of the single-domain structure determined in the present study with the equivalent domain within full-length ERp27, determined independently by X-ray diffraction, indicated very close agreement. The domain interface inferred from NMR data in solution was much more extensive than that observed in the X-ray structure, suggesting that the domains flex independently and that crystallization selects one specific interdomain orientation. This led us to apply a new rapid method to simulate the flexibility of the full-length protein, establishing that the domains show considerable freedom to flex (tilt and twist) about the interdomain linker, consistent with the NMR data. |
format | Online Article Text |
id | pubmed-4203274 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Portland Press Ltd. |
record_format | MEDLINE/PubMed |
spelling | pubmed-42032742014-10-21 High-resolution NMR studies of structure and dynamics of human ERp27 indicate extensive interdomain flexibility Amin, Nader T. Wallis, A. Katrine Wells, Stephen A. Rowe, Michelle L. Williamson, Richard A. Howard, Mark J. Freedman, Robert B. Biochem J Research Article ERp27 (endoplasmic reticulum protein 27.7 kDa) is a homologue of PDI (protein disulfide-isomerase) localized to the endoplasmic reticulum. ERp27 is predicted to consist of two thioredoxin-fold domains homologous with the non-catalytic b and b′ domains of PDI. The structure in solution of the N-terminal b-like domain of ERp27 was solved using high-resolution NMR data. The structure confirms that it has the thioredoxin fold and that ERp27 is a member of the PDI family. (15)N-NMR relaxation data were obtained and ModelFree analysis highlighted limited exchange contributions and slow internal motions, and indicated that the domain has an average order parameter S(2) of 0.79. Comparison of the single-domain structure determined in the present study with the equivalent domain within full-length ERp27, determined independently by X-ray diffraction, indicated very close agreement. The domain interface inferred from NMR data in solution was much more extensive than that observed in the X-ray structure, suggesting that the domains flex independently and that crystallization selects one specific interdomain orientation. This led us to apply a new rapid method to simulate the flexibility of the full-length protein, establishing that the domains show considerable freedom to flex (tilt and twist) about the interdomain linker, consistent with the NMR data. Portland Press Ltd. 2013-02-15 2013-03-01 /pmc/articles/PMC4203274/ /pubmed/23234573 http://dx.doi.org/10.1042/BJ20121635 Text en © 2013 The Author(s) The author(s) has paid for this article to be freely available under the terms of the Creative Commons Attribution Non-Commercial Licence (http://creativecommons.org/licenses/by-nc/2.5/) which permits unrestricted non-commercial use, distribution and reproduction in any medium, provided the original work is properly cited. http://creativecommons.org/licenses/by-nc/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Amin, Nader T. Wallis, A. Katrine Wells, Stephen A. Rowe, Michelle L. Williamson, Richard A. Howard, Mark J. Freedman, Robert B. High-resolution NMR studies of structure and dynamics of human ERp27 indicate extensive interdomain flexibility |
title | High-resolution NMR studies of structure and dynamics of human ERp27 indicate
extensive interdomain flexibility |
title_full | High-resolution NMR studies of structure and dynamics of human ERp27 indicate
extensive interdomain flexibility |
title_fullStr | High-resolution NMR studies of structure and dynamics of human ERp27 indicate
extensive interdomain flexibility |
title_full_unstemmed | High-resolution NMR studies of structure and dynamics of human ERp27 indicate
extensive interdomain flexibility |
title_short | High-resolution NMR studies of structure and dynamics of human ERp27 indicate
extensive interdomain flexibility |
title_sort | high-resolution nmr studies of structure and dynamics of human erp27 indicate
extensive interdomain flexibility |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4203274/ https://www.ncbi.nlm.nih.gov/pubmed/23234573 http://dx.doi.org/10.1042/BJ20121635 |
work_keys_str_mv | AT aminnadert highresolutionnmrstudiesofstructureanddynamicsofhumanerp27indicateextensiveinterdomainflexibility AT wallisakatrine highresolutionnmrstudiesofstructureanddynamicsofhumanerp27indicateextensiveinterdomainflexibility AT wellsstephena highresolutionnmrstudiesofstructureanddynamicsofhumanerp27indicateextensiveinterdomainflexibility AT rowemichellel highresolutionnmrstudiesofstructureanddynamicsofhumanerp27indicateextensiveinterdomainflexibility AT williamsonricharda highresolutionnmrstudiesofstructureanddynamicsofhumanerp27indicateextensiveinterdomainflexibility AT howardmarkj highresolutionnmrstudiesofstructureanddynamicsofhumanerp27indicateextensiveinterdomainflexibility AT freedmanrobertb highresolutionnmrstudiesofstructureanddynamicsofhumanerp27indicateextensiveinterdomainflexibility |