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Isolated Assessment of Translation or Rotation Severely Underestimates the Effects of Subject Motion in fMRI Data
Subject motion has long since been known to be a major confound in functional MRI studies of the human brain. For resting-state functional MRI in particular, data corruption due to motion artefacts has been shown to be most relevant. However, despite 6 parameters (3 for translations and 3 for rotati...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Public Library of Science
2014
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4204812/ https://www.ncbi.nlm.nih.gov/pubmed/25333359 http://dx.doi.org/10.1371/journal.pone.0106498 |
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author | Wilke, Marko |
author_facet | Wilke, Marko |
author_sort | Wilke, Marko |
collection | PubMed |
description | Subject motion has long since been known to be a major confound in functional MRI studies of the human brain. For resting-state functional MRI in particular, data corruption due to motion artefacts has been shown to be most relevant. However, despite 6 parameters (3 for translations and 3 for rotations) being required to fully describe the head's motion trajectory between timepoints, not all are routinely used to assess subject motion. Using structural (n = 964) as well as functional MRI (n = 200) data from public repositories, a series of experiments was performed to assess the impact of using a reduced parameter set (translation(only) and rotation(only)) versus using the complete parameter set. It could be shown that the usage of 65 mm as an indicator of the average cortical distance is a valid approximation in adults, although care must be taken when comparing children and adults using the same measure. The effect of using slightly smaller or larger values is minimal. Further, both translation(only) and rotation(only) severely underestimate the full extent of subject motion; consequently, both translation(only) and rotation(only) discard substantially fewer datapoints when used for quality control purposes (“motion scrubbing”). Finally, both translation(only) and rotation(only) severely underperform in predicting the full extent of the signal changes and the overall variance explained by motion in functional MRI data. These results suggest that a comprehensive measure, taking into account all available parameters, should be used to characterize subject motion in fMRI. |
format | Online Article Text |
id | pubmed-4204812 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-42048122014-10-27 Isolated Assessment of Translation or Rotation Severely Underestimates the Effects of Subject Motion in fMRI Data Wilke, Marko PLoS One Research Article Subject motion has long since been known to be a major confound in functional MRI studies of the human brain. For resting-state functional MRI in particular, data corruption due to motion artefacts has been shown to be most relevant. However, despite 6 parameters (3 for translations and 3 for rotations) being required to fully describe the head's motion trajectory between timepoints, not all are routinely used to assess subject motion. Using structural (n = 964) as well as functional MRI (n = 200) data from public repositories, a series of experiments was performed to assess the impact of using a reduced parameter set (translation(only) and rotation(only)) versus using the complete parameter set. It could be shown that the usage of 65 mm as an indicator of the average cortical distance is a valid approximation in adults, although care must be taken when comparing children and adults using the same measure. The effect of using slightly smaller or larger values is minimal. Further, both translation(only) and rotation(only) severely underestimate the full extent of subject motion; consequently, both translation(only) and rotation(only) discard substantially fewer datapoints when used for quality control purposes (“motion scrubbing”). Finally, both translation(only) and rotation(only) severely underperform in predicting the full extent of the signal changes and the overall variance explained by motion in functional MRI data. These results suggest that a comprehensive measure, taking into account all available parameters, should be used to characterize subject motion in fMRI. Public Library of Science 2014-10-21 /pmc/articles/PMC4204812/ /pubmed/25333359 http://dx.doi.org/10.1371/journal.pone.0106498 Text en © 2014 Marko Wilke http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Wilke, Marko Isolated Assessment of Translation or Rotation Severely Underestimates the Effects of Subject Motion in fMRI Data |
title | Isolated Assessment of Translation or Rotation Severely Underestimates the Effects of Subject Motion in fMRI Data |
title_full | Isolated Assessment of Translation or Rotation Severely Underestimates the Effects of Subject Motion in fMRI Data |
title_fullStr | Isolated Assessment of Translation or Rotation Severely Underestimates the Effects of Subject Motion in fMRI Data |
title_full_unstemmed | Isolated Assessment of Translation or Rotation Severely Underestimates the Effects of Subject Motion in fMRI Data |
title_short | Isolated Assessment of Translation or Rotation Severely Underestimates the Effects of Subject Motion in fMRI Data |
title_sort | isolated assessment of translation or rotation severely underestimates the effects of subject motion in fmri data |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4204812/ https://www.ncbi.nlm.nih.gov/pubmed/25333359 http://dx.doi.org/10.1371/journal.pone.0106498 |
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