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Injection of Fully-Defined Signal Mixtures: A Novel High-Throughput Tool to Study Neuronal Encoding and Computations
Understanding of how neurons transform fluctuations of membrane potential, reflecting input activity, into spike responses, which communicate the ultimate results of single-neuron computation, is one of the central challenges for cellular and computational neuroscience. To study this transformation...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4204817/ https://www.ncbi.nlm.nih.gov/pubmed/25335081 http://dx.doi.org/10.1371/journal.pone.0109928 |
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author | Ilin, Vladimir Stevenson, Ian H. Volgushev, Maxim |
author_facet | Ilin, Vladimir Stevenson, Ian H. Volgushev, Maxim |
author_sort | Ilin, Vladimir |
collection | PubMed |
description | Understanding of how neurons transform fluctuations of membrane potential, reflecting input activity, into spike responses, which communicate the ultimate results of single-neuron computation, is one of the central challenges for cellular and computational neuroscience. To study this transformation under controlled conditions, previous work has used a signal immersed in noise paradigm where neurons are injected with a current consisting of fluctuating noise that mimics on-going synaptic activity and a systematic signal whose transmission is studied. One limitation of this established paradigm is that it is designed to examine the encoding of only one signal under a specific, repeated condition. As a result, characterizing how encoding depends on neuronal properties, signal parameters, and the interaction of multiple inputs is cumbersome. Here we introduce a novel fully-defined signal mixture paradigm, which allows us to overcome these problems. In this paradigm, current for injection is synthetized as a sum of artificial postsynaptic currents (PSCs) resulting from the activity of a large population of model presynaptic neurons. PSCs from any presynaptic neuron(s) can be now considered as “signal”, while the sum of all other inputs is considered as “noise”. This allows us to study the encoding of a large number of different signals in a single experiment, thus dramatically increasing the throughput of data acquisition. Using this novel paradigm, we characterize the detection of excitatory and inhibitory PSCs from neuronal spike responses over a wide range of amplitudes and firing-rates. We show, that for moderately-sized neuronal populations the detectability of individual inputs is higher for excitatory than for inhibitory inputs during the 2–5 ms following PSC onset, but becomes comparable after 7–8 ms. This transient imbalance of sensitivity in favor of excitation may enhance propagation of balanced signals through neuronal networks. Finally, we discuss several open questions that this novel high-throughput paradigm may address. |
format | Online Article Text |
id | pubmed-4204817 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-42048172014-10-27 Injection of Fully-Defined Signal Mixtures: A Novel High-Throughput Tool to Study Neuronal Encoding and Computations Ilin, Vladimir Stevenson, Ian H. Volgushev, Maxim PLoS One Research Article Understanding of how neurons transform fluctuations of membrane potential, reflecting input activity, into spike responses, which communicate the ultimate results of single-neuron computation, is one of the central challenges for cellular and computational neuroscience. To study this transformation under controlled conditions, previous work has used a signal immersed in noise paradigm where neurons are injected with a current consisting of fluctuating noise that mimics on-going synaptic activity and a systematic signal whose transmission is studied. One limitation of this established paradigm is that it is designed to examine the encoding of only one signal under a specific, repeated condition. As a result, characterizing how encoding depends on neuronal properties, signal parameters, and the interaction of multiple inputs is cumbersome. Here we introduce a novel fully-defined signal mixture paradigm, which allows us to overcome these problems. In this paradigm, current for injection is synthetized as a sum of artificial postsynaptic currents (PSCs) resulting from the activity of a large population of model presynaptic neurons. PSCs from any presynaptic neuron(s) can be now considered as “signal”, while the sum of all other inputs is considered as “noise”. This allows us to study the encoding of a large number of different signals in a single experiment, thus dramatically increasing the throughput of data acquisition. Using this novel paradigm, we characterize the detection of excitatory and inhibitory PSCs from neuronal spike responses over a wide range of amplitudes and firing-rates. We show, that for moderately-sized neuronal populations the detectability of individual inputs is higher for excitatory than for inhibitory inputs during the 2–5 ms following PSC onset, but becomes comparable after 7–8 ms. This transient imbalance of sensitivity in favor of excitation may enhance propagation of balanced signals through neuronal networks. Finally, we discuss several open questions that this novel high-throughput paradigm may address. Public Library of Science 2014-10-21 /pmc/articles/PMC4204817/ /pubmed/25335081 http://dx.doi.org/10.1371/journal.pone.0109928 Text en © 2014 Ilin et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Ilin, Vladimir Stevenson, Ian H. Volgushev, Maxim Injection of Fully-Defined Signal Mixtures: A Novel High-Throughput Tool to Study Neuronal Encoding and Computations |
title | Injection of Fully-Defined Signal Mixtures: A Novel High-Throughput Tool to Study Neuronal Encoding and Computations |
title_full | Injection of Fully-Defined Signal Mixtures: A Novel High-Throughput Tool to Study Neuronal Encoding and Computations |
title_fullStr | Injection of Fully-Defined Signal Mixtures: A Novel High-Throughput Tool to Study Neuronal Encoding and Computations |
title_full_unstemmed | Injection of Fully-Defined Signal Mixtures: A Novel High-Throughput Tool to Study Neuronal Encoding and Computations |
title_short | Injection of Fully-Defined Signal Mixtures: A Novel High-Throughput Tool to Study Neuronal Encoding and Computations |
title_sort | injection of fully-defined signal mixtures: a novel high-throughput tool to study neuronal encoding and computations |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4204817/ https://www.ncbi.nlm.nih.gov/pubmed/25335081 http://dx.doi.org/10.1371/journal.pone.0109928 |
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