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Genetic divergence in natural populations of bronze featherback, Notopterus notopterus (Osteoglossiformes: Notopteridae) from five Indian rivers, analyzed through mtDNA ATPase6/8 regions()
The present study characterized 842 bp fragment of mitochondrial ATP synthase 6 and 8 (ATPase6/8) genes in Notopterus notopterus. In all, 97 samples of N. notopterus were collected from five distant rivers; viz Satluj, Gomti, Yamuna, Brahmaputra and Mahanadi representing 4 river basins in India. The...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Elsevier
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4205040/ https://www.ncbi.nlm.nih.gov/pubmed/25606374 http://dx.doi.org/10.1016/j.mgene.2013.10.007 |
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author | Gupta, Arti Lal, Kuldeep K. Mohindra, Vindhya Singh, Rajeev K. Punia, Peyush Dwivedi, Arvind K. Gupta, B.K. Luhariya, Rupesh K. Masih, Prachi Mishra, R.M. Jena, J.K. |
author_facet | Gupta, Arti Lal, Kuldeep K. Mohindra, Vindhya Singh, Rajeev K. Punia, Peyush Dwivedi, Arvind K. Gupta, B.K. Luhariya, Rupesh K. Masih, Prachi Mishra, R.M. Jena, J.K. |
author_sort | Gupta, Arti |
collection | PubMed |
description | The present study characterized 842 bp fragment of mitochondrial ATP synthase 6 and 8 (ATPase6/8) genes in Notopterus notopterus. In all, 97 samples of N. notopterus were collected from five distant rivers; viz Satluj, Gomti, Yamuna, Brahmaputra and Mahanadi representing 4 river basins in India. The analysis of variation revealed presence of 23 haplotypes in ATPase6/8 gene with haplotype diversity (Hd) of 0.899 and nucleotide diversity (π) of 0.00336. The within population variation which was 41.78% of the total variation of 58.22% was found among population. The Fst value of 0.582 (P < 0.05) of the total population was found significant. The results concluded that the polymorphism in ATPase6/8 gene is a potential marker that is important for determining genetic divergence of wild N. notopterus populations. The findings reveal common ancestry of mahanadi population with the populations in rivers of Indo-Gangetic region. However, long evolutionary isolation must be responsible for the high genetic divergence between N. notopterus in Mahanadi and other regions. |
format | Online Article Text |
id | pubmed-4205040 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-42050402015-01-20 Genetic divergence in natural populations of bronze featherback, Notopterus notopterus (Osteoglossiformes: Notopteridae) from five Indian rivers, analyzed through mtDNA ATPase6/8 regions() Gupta, Arti Lal, Kuldeep K. Mohindra, Vindhya Singh, Rajeev K. Punia, Peyush Dwivedi, Arvind K. Gupta, B.K. Luhariya, Rupesh K. Masih, Prachi Mishra, R.M. Jena, J.K. Meta Gene Article The present study characterized 842 bp fragment of mitochondrial ATP synthase 6 and 8 (ATPase6/8) genes in Notopterus notopterus. In all, 97 samples of N. notopterus were collected from five distant rivers; viz Satluj, Gomti, Yamuna, Brahmaputra and Mahanadi representing 4 river basins in India. The analysis of variation revealed presence of 23 haplotypes in ATPase6/8 gene with haplotype diversity (Hd) of 0.899 and nucleotide diversity (π) of 0.00336. The within population variation which was 41.78% of the total variation of 58.22% was found among population. The Fst value of 0.582 (P < 0.05) of the total population was found significant. The results concluded that the polymorphism in ATPase6/8 gene is a potential marker that is important for determining genetic divergence of wild N. notopterus populations. The findings reveal common ancestry of mahanadi population with the populations in rivers of Indo-Gangetic region. However, long evolutionary isolation must be responsible for the high genetic divergence between N. notopterus in Mahanadi and other regions. Elsevier 2013-11-12 /pmc/articles/PMC4205040/ /pubmed/25606374 http://dx.doi.org/10.1016/j.mgene.2013.10.007 Text en © 2013 The Authors http://creativecommons.org/licenses/by-nc-nd/3.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/3.0/). |
spellingShingle | Article Gupta, Arti Lal, Kuldeep K. Mohindra, Vindhya Singh, Rajeev K. Punia, Peyush Dwivedi, Arvind K. Gupta, B.K. Luhariya, Rupesh K. Masih, Prachi Mishra, R.M. Jena, J.K. Genetic divergence in natural populations of bronze featherback, Notopterus notopterus (Osteoglossiformes: Notopteridae) from five Indian rivers, analyzed through mtDNA ATPase6/8 regions() |
title | Genetic divergence in natural populations of bronze featherback, Notopterus notopterus (Osteoglossiformes: Notopteridae) from five Indian rivers, analyzed through mtDNA ATPase6/8 regions() |
title_full | Genetic divergence in natural populations of bronze featherback, Notopterus notopterus (Osteoglossiformes: Notopteridae) from five Indian rivers, analyzed through mtDNA ATPase6/8 regions() |
title_fullStr | Genetic divergence in natural populations of bronze featherback, Notopterus notopterus (Osteoglossiformes: Notopteridae) from five Indian rivers, analyzed through mtDNA ATPase6/8 regions() |
title_full_unstemmed | Genetic divergence in natural populations of bronze featherback, Notopterus notopterus (Osteoglossiformes: Notopteridae) from five Indian rivers, analyzed through mtDNA ATPase6/8 regions() |
title_short | Genetic divergence in natural populations of bronze featherback, Notopterus notopterus (Osteoglossiformes: Notopteridae) from five Indian rivers, analyzed through mtDNA ATPase6/8 regions() |
title_sort | genetic divergence in natural populations of bronze featherback, notopterus notopterus (osteoglossiformes: notopteridae) from five indian rivers, analyzed through mtdna atpase6/8 regions() |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4205040/ https://www.ncbi.nlm.nih.gov/pubmed/25606374 http://dx.doi.org/10.1016/j.mgene.2013.10.007 |
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