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Estimation of Anti-HIV Activity of HEPT Analogues Using MLR, ANN, and SVM Techniques
The present study deals with the estimation of the anti-HIV activity (log1/C) of a large set of 107 HEPT analogues using molecular descriptors which are responsible for the anti-HIV activity. The study has been undertaken by three techniques MLR, ANN, and SVM. The MLR model fits the train set with R...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi Publishing Corporation
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4207402/ https://www.ncbi.nlm.nih.gov/pubmed/25379290 http://dx.doi.org/10.1155/2013/795621 |
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author | Shaik, Basheerulla Zafar, Tabassum Agrawal, Vijay K. |
author_facet | Shaik, Basheerulla Zafar, Tabassum Agrawal, Vijay K. |
author_sort | Shaik, Basheerulla |
collection | PubMed |
description | The present study deals with the estimation of the anti-HIV activity (log1/C) of a large set of 107 HEPT analogues using molecular descriptors which are responsible for the anti-HIV activity. The study has been undertaken by three techniques MLR, ANN, and SVM. The MLR model fits the train set with R (2)=0.856 while in ANN and SVM with higher values of R (2) = 0.850, 0.874, respectively. SVM model shows improvement to estimate the anti-HIV activity of trained data, while in test set ANN have higher R (2) value than those of MLR and SVM techniques. R (m) (2) = metrics and ridge regression analysis indicated that the proposed four-variable model MATS5e, RDF080u, T(O⋯O), and MATS5m as correlating descriptors is the best for estimating the anti-HIV activity (log 1/C) present set of compounds. |
format | Online Article Text |
id | pubmed-4207402 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Hindawi Publishing Corporation |
record_format | MEDLINE/PubMed |
spelling | pubmed-42074022014-11-06 Estimation of Anti-HIV Activity of HEPT Analogues Using MLR, ANN, and SVM Techniques Shaik, Basheerulla Zafar, Tabassum Agrawal, Vijay K. Int J Med Chem Research Article The present study deals with the estimation of the anti-HIV activity (log1/C) of a large set of 107 HEPT analogues using molecular descriptors which are responsible for the anti-HIV activity. The study has been undertaken by three techniques MLR, ANN, and SVM. The MLR model fits the train set with R (2)=0.856 while in ANN and SVM with higher values of R (2) = 0.850, 0.874, respectively. SVM model shows improvement to estimate the anti-HIV activity of trained data, while in test set ANN have higher R (2) value than those of MLR and SVM techniques. R (m) (2) = metrics and ridge regression analysis indicated that the proposed four-variable model MATS5e, RDF080u, T(O⋯O), and MATS5m as correlating descriptors is the best for estimating the anti-HIV activity (log 1/C) present set of compounds. Hindawi Publishing Corporation 2013 2013-12-30 /pmc/articles/PMC4207402/ /pubmed/25379290 http://dx.doi.org/10.1155/2013/795621 Text en Copyright © 2013 Basheerulla Shaik et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Shaik, Basheerulla Zafar, Tabassum Agrawal, Vijay K. Estimation of Anti-HIV Activity of HEPT Analogues Using MLR, ANN, and SVM Techniques |
title | Estimation of Anti-HIV Activity of HEPT Analogues Using MLR, ANN, and SVM Techniques |
title_full | Estimation of Anti-HIV Activity of HEPT Analogues Using MLR, ANN, and SVM Techniques |
title_fullStr | Estimation of Anti-HIV Activity of HEPT Analogues Using MLR, ANN, and SVM Techniques |
title_full_unstemmed | Estimation of Anti-HIV Activity of HEPT Analogues Using MLR, ANN, and SVM Techniques |
title_short | Estimation of Anti-HIV Activity of HEPT Analogues Using MLR, ANN, and SVM Techniques |
title_sort | estimation of anti-hiv activity of hept analogues using mlr, ann, and svm techniques |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4207402/ https://www.ncbi.nlm.nih.gov/pubmed/25379290 http://dx.doi.org/10.1155/2013/795621 |
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