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Possible Function of the ribT Gene of Bacillus subtilis: Theoretical Prediction, Cloning, and Expression

The complete decipherment of the functions and interactions of the elements of the riboflavin biosynthesis operon (rib operon) of Bacillus subtilis are necessary for the development of superproducers of this important vitamin. The function of its terminal ribT gene has not been established to date....

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Autores principales: Yakimov, A. P., Seregina, T. A., Kholodnyak, A. A., Kreneva, R. A., Mironov, A. S., Perumov, D. A., Timkovskii, A. L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: A.I. Gordeyev 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4207565/
https://www.ncbi.nlm.nih.gov/pubmed/25349719
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author Yakimov, A. P.
Seregina, T. A.
Kholodnyak, A. A.
Kreneva, R. A.
Mironov, A. S.
Perumov, D. A.
Timkovskii, A. L.
author_facet Yakimov, A. P.
Seregina, T. A.
Kholodnyak, A. A.
Kreneva, R. A.
Mironov, A. S.
Perumov, D. A.
Timkovskii, A. L.
author_sort Yakimov, A. P.
collection PubMed
description The complete decipherment of the functions and interactions of the elements of the riboflavin biosynthesis operon (rib operon) of Bacillus subtilis are necessary for the development of superproducers of this important vitamin. The function of its terminal ribT gene has not been established to date. In this work, a search for homologs of the hypothetical amino acid sequence of the gene product through databases, as well as an analysis of the homolgs, was performed; the distribution of secondary structure elements was theoretically predicted; and the tertiary structure of the RibT protein was proposed. The ribT gene nucleotide sequence was amplified and cloned into the standard high-copy expression vector pET15b and then expressed after induction with IPTG in E. coli BL21 (DE3) strain cells containing the inducible phage T7 RNA polymerase gene. The ribT gene expression was confirmed by SDS-PAGE. The protein product of the expression was purified by affinity chromatography. Therefore, the real possibility of RibT protein production in quantities sufficient for further investigation of its structure and functional activity was demonstrated.
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spelling pubmed-42075652014-10-27 Possible Function of the ribT Gene of Bacillus subtilis: Theoretical Prediction, Cloning, and Expression Yakimov, A. P. Seregina, T. A. Kholodnyak, A. A. Kreneva, R. A. Mironov, A. S. Perumov, D. A. Timkovskii, A. L. Acta Naturae Research Article The complete decipherment of the functions and interactions of the elements of the riboflavin biosynthesis operon (rib operon) of Bacillus subtilis are necessary for the development of superproducers of this important vitamin. The function of its terminal ribT gene has not been established to date. In this work, a search for homologs of the hypothetical amino acid sequence of the gene product through databases, as well as an analysis of the homolgs, was performed; the distribution of secondary structure elements was theoretically predicted; and the tertiary structure of the RibT protein was proposed. The ribT gene nucleotide sequence was amplified and cloned into the standard high-copy expression vector pET15b and then expressed after induction with IPTG in E. coli BL21 (DE3) strain cells containing the inducible phage T7 RNA polymerase gene. The ribT gene expression was confirmed by SDS-PAGE. The protein product of the expression was purified by affinity chromatography. Therefore, the real possibility of RibT protein production in quantities sufficient for further investigation of its structure and functional activity was demonstrated. A.I. Gordeyev 2014 /pmc/articles/PMC4207565/ /pubmed/25349719 Text en Copyright ® 2014 Park-media Ltd. http://creativecommons.org/licenses/by/2.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Yakimov, A. P.
Seregina, T. A.
Kholodnyak, A. A.
Kreneva, R. A.
Mironov, A. S.
Perumov, D. A.
Timkovskii, A. L.
Possible Function of the ribT Gene of Bacillus subtilis: Theoretical Prediction, Cloning, and Expression
title Possible Function of the ribT Gene of Bacillus subtilis: Theoretical Prediction, Cloning, and Expression
title_full Possible Function of the ribT Gene of Bacillus subtilis: Theoretical Prediction, Cloning, and Expression
title_fullStr Possible Function of the ribT Gene of Bacillus subtilis: Theoretical Prediction, Cloning, and Expression
title_full_unstemmed Possible Function of the ribT Gene of Bacillus subtilis: Theoretical Prediction, Cloning, and Expression
title_short Possible Function of the ribT Gene of Bacillus subtilis: Theoretical Prediction, Cloning, and Expression
title_sort possible function of the ribt gene of bacillus subtilis: theoretical prediction, cloning, and expression
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4207565/
https://www.ncbi.nlm.nih.gov/pubmed/25349719
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