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A Closed Parameterization of DNA–Damage by Charged Particles, as a Function of Energy — A Geometrical Approach

PURPOSE: To present a closed formalism calculating charged particle radiation damage induced in DNA. The formalism is valid for all types of charged particles and due to its closed nature is suited to provide fast conversion of dose to DNA-damage. METHODS: The induction of double strand breaks in DN...

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Autor principal: Van den Heuvel, Frank
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4207739/
https://www.ncbi.nlm.nih.gov/pubmed/25340636
http://dx.doi.org/10.1371/journal.pone.0110333
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author Van den Heuvel, Frank
author_facet Van den Heuvel, Frank
author_sort Van den Heuvel, Frank
collection PubMed
description PURPOSE: To present a closed formalism calculating charged particle radiation damage induced in DNA. The formalism is valid for all types of charged particles and due to its closed nature is suited to provide fast conversion of dose to DNA-damage. METHODS: The induction of double strand breaks in DNA–strings residing in irradiated cells is quantified using a single particle model. This leads to a proposal to use the cumulative Cauchy distribution to express the mix of high and low LET type damage probability generated by a single particle. A microscopic phenomenological Monte Carlo code is used to fit the parameters of the model as a function of kinetic energy related to the damage to a DNA molecule embedded in a cell. The model is applied for four particles: electrons, protons, alpha–particles, and carbon ions. A geometric interpretation of this observation using the impact ionization mean free path as a quantifier, allows extension of the model to very low energies. RESULTS: The mathematical expression describes the model adequately using a chi–square test ([Image: see text]). This applies to all particle types with an almost perfect fit for protons, while the other particles seem to result in some discrepancies at very low energies. The implementation calculating a strict version of the RBE based on complex damage alone is corroborated by experimental data from the measured RBE. The geometric interpretation generates a unique dimensionless parameter [Image: see text] for each type of charged particle. In addition, it predicts a distribution of DNA damage which is different from the current models.
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spelling pubmed-42077392014-10-27 A Closed Parameterization of DNA–Damage by Charged Particles, as a Function of Energy — A Geometrical Approach Van den Heuvel, Frank PLoS One Research Article PURPOSE: To present a closed formalism calculating charged particle radiation damage induced in DNA. The formalism is valid for all types of charged particles and due to its closed nature is suited to provide fast conversion of dose to DNA-damage. METHODS: The induction of double strand breaks in DNA–strings residing in irradiated cells is quantified using a single particle model. This leads to a proposal to use the cumulative Cauchy distribution to express the mix of high and low LET type damage probability generated by a single particle. A microscopic phenomenological Monte Carlo code is used to fit the parameters of the model as a function of kinetic energy related to the damage to a DNA molecule embedded in a cell. The model is applied for four particles: electrons, protons, alpha–particles, and carbon ions. A geometric interpretation of this observation using the impact ionization mean free path as a quantifier, allows extension of the model to very low energies. RESULTS: The mathematical expression describes the model adequately using a chi–square test ([Image: see text]). This applies to all particle types with an almost perfect fit for protons, while the other particles seem to result in some discrepancies at very low energies. The implementation calculating a strict version of the RBE based on complex damage alone is corroborated by experimental data from the measured RBE. The geometric interpretation generates a unique dimensionless parameter [Image: see text] for each type of charged particle. In addition, it predicts a distribution of DNA damage which is different from the current models. Public Library of Science 2014-10-23 /pmc/articles/PMC4207739/ /pubmed/25340636 http://dx.doi.org/10.1371/journal.pone.0110333 Text en © 2014 Frank Van den Heuvel http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Van den Heuvel, Frank
A Closed Parameterization of DNA–Damage by Charged Particles, as a Function of Energy — A Geometrical Approach
title A Closed Parameterization of DNA–Damage by Charged Particles, as a Function of Energy — A Geometrical Approach
title_full A Closed Parameterization of DNA–Damage by Charged Particles, as a Function of Energy — A Geometrical Approach
title_fullStr A Closed Parameterization of DNA–Damage by Charged Particles, as a Function of Energy — A Geometrical Approach
title_full_unstemmed A Closed Parameterization of DNA–Damage by Charged Particles, as a Function of Energy — A Geometrical Approach
title_short A Closed Parameterization of DNA–Damage by Charged Particles, as a Function of Energy — A Geometrical Approach
title_sort closed parameterization of dna–damage by charged particles, as a function of energy — a geometrical approach
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4207739/
https://www.ncbi.nlm.nih.gov/pubmed/25340636
http://dx.doi.org/10.1371/journal.pone.0110333
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