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Identification of nucleotide sequence involved in Weissellicin L production
BACKGROUND: Weissellicin L, a novel bacteriocin produced by Weissella hellenica 4–7, was previously characterized but its full amino acid sequence remain unknown. The draft genome sequencing analysis of Weissella hellenica 4–7 was performed and the open reading frame (ORF) encoding the weissellicin...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4209004/ https://www.ncbi.nlm.nih.gov/pubmed/25392788 http://dx.doi.org/10.1186/2193-1801-3-617 |
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author | Chen, Yi-sheng Lee, Yun-shien Wu, Hui-chung Chiang, Chih-ming Pan, Shwu-fen Leong, Kun-hon |
author_facet | Chen, Yi-sheng Lee, Yun-shien Wu, Hui-chung Chiang, Chih-ming Pan, Shwu-fen Leong, Kun-hon |
author_sort | Chen, Yi-sheng |
collection | PubMed |
description | BACKGROUND: Weissellicin L, a novel bacteriocin produced by Weissella hellenica 4–7, was previously characterized but its full amino acid sequence remain unknown. The draft genome sequencing analysis of Weissella hellenica 4–7 was performed and the open reading frame (ORF) encoding the weissellicin L was identified and clarified. FINDINGS: The obtained results indicated that the mature bacteriocin consists of 29 amino acid residues with a molecular weight of approximately 3205.64 Da. A conserved processing site of two glycine residues in positions -1 and -2 was observed in the leader peptides. The possibility that bacteriocin secretion depended on ATP-binding cassette (ABC) transporter was therefore suggested. Furthermore, primers were designed from 5’ and 3’ flanking sequences of the weissellicin L structural gene. PCR presented a single product and was useful to detect weissellicin L structural gene. CONCLUSIONS: To our knowledge, this is the first report describing the full amino acid sequence of Weissellicin L. A rapid method to detect weissellicin L structural gene was also reported in this study. |
format | Online Article Text |
id | pubmed-4209004 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-42090042014-11-12 Identification of nucleotide sequence involved in Weissellicin L production Chen, Yi-sheng Lee, Yun-shien Wu, Hui-chung Chiang, Chih-ming Pan, Shwu-fen Leong, Kun-hon Springerplus Short Report BACKGROUND: Weissellicin L, a novel bacteriocin produced by Weissella hellenica 4–7, was previously characterized but its full amino acid sequence remain unknown. The draft genome sequencing analysis of Weissella hellenica 4–7 was performed and the open reading frame (ORF) encoding the weissellicin L was identified and clarified. FINDINGS: The obtained results indicated that the mature bacteriocin consists of 29 amino acid residues with a molecular weight of approximately 3205.64 Da. A conserved processing site of two glycine residues in positions -1 and -2 was observed in the leader peptides. The possibility that bacteriocin secretion depended on ATP-binding cassette (ABC) transporter was therefore suggested. Furthermore, primers were designed from 5’ and 3’ flanking sequences of the weissellicin L structural gene. PCR presented a single product and was useful to detect weissellicin L structural gene. CONCLUSIONS: To our knowledge, this is the first report describing the full amino acid sequence of Weissellicin L. A rapid method to detect weissellicin L structural gene was also reported in this study. Springer International Publishing 2014-10-18 /pmc/articles/PMC4209004/ /pubmed/25392788 http://dx.doi.org/10.1186/2193-1801-3-617 Text en © Chen et al.; licensee Springer. 2014 This article is published under license to BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. |
spellingShingle | Short Report Chen, Yi-sheng Lee, Yun-shien Wu, Hui-chung Chiang, Chih-ming Pan, Shwu-fen Leong, Kun-hon Identification of nucleotide sequence involved in Weissellicin L production |
title | Identification of nucleotide sequence involved in Weissellicin L production |
title_full | Identification of nucleotide sequence involved in Weissellicin L production |
title_fullStr | Identification of nucleotide sequence involved in Weissellicin L production |
title_full_unstemmed | Identification of nucleotide sequence involved in Weissellicin L production |
title_short | Identification of nucleotide sequence involved in Weissellicin L production |
title_sort | identification of nucleotide sequence involved in weissellicin l production |
topic | Short Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4209004/ https://www.ncbi.nlm.nih.gov/pubmed/25392788 http://dx.doi.org/10.1186/2193-1801-3-617 |
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