Orthology Inference in Nonmodel Organisms Using Transcriptomes and Low-Coverage Genomes: Improving Accuracy and Matrix Occupancy for Phylogenomics

Orthology inference is central to phylogenomic analyses. Phylogenomic data sets commonly include transcriptomes and low-coverage genomes that are incomplete and contain errors and isoforms. These properties can severely violate the underlying assumptions of orthology inference with existing heuristi...

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Detalles Bibliográficos
Autores principales: Yang, Ya, Smith, Stephen A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2014
Materias:
Methods
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4209138/
https://www.ncbi.nlm.nih.gov/pubmed/25158799
http://dx.doi.org/10.1093/molbev/msu245

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4209138/
https://www.ncbi.nlm.nih.gov/pubmed/25158799
http://dx.doi.org/10.1093/molbev/msu245

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