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The conserved mitochondrial gene distribution in relatives of Turritopsis nutricula, an immortal jellyfish

Turritopsis nutricula (T. nutricula) is the one of the known reported organisms that can revert its life cycle to the polyp stage even after becoming sexually mature, defining itself as the only immortal organism in the animal kingdom. Therefore, the animal is having prime importance in basic biolog...

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Autores principales: Devarapalli, Pratap, Kumavath, Ranjith N, Barh, Debmalya, Azevedo, Vasco
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Biomedical Informatics 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4209368/
https://www.ncbi.nlm.nih.gov/pubmed/25352727
http://dx.doi.org/10.6026/97320630010586
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author Devarapalli, Pratap
Kumavath, Ranjith N
Barh, Debmalya
Azevedo, Vasco
author_facet Devarapalli, Pratap
Kumavath, Ranjith N
Barh, Debmalya
Azevedo, Vasco
author_sort Devarapalli, Pratap
collection PubMed
description Turritopsis nutricula (T. nutricula) is the one of the known reported organisms that can revert its life cycle to the polyp stage even after becoming sexually mature, defining itself as the only immortal organism in the animal kingdom. Therefore, the animal is having prime importance in basic biological, aging, and biomedical researches. However, till date, the genome of this organism has not been sequenced and even there is no molecular phylogenetic study to reveal its close relatives. Here, using phylogenetic analysis based on available 16s rRNA gene and protein sequences of Cytochrome oxidase subunit-I (COI or COX1) of T. nutricula, we have predicted the closest relatives of the organism. While we found Nemopsis bachei could be closest organism based on COX1 gene sequence; T. dohrnii may be designated as the closest taxon to T. nutricula based on rRNA. Moreover, we have figured out four species that showed similar root distance based on COX1 protein sequence.
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spelling pubmed-42093682014-10-28 The conserved mitochondrial gene distribution in relatives of Turritopsis nutricula, an immortal jellyfish Devarapalli, Pratap Kumavath, Ranjith N Barh, Debmalya Azevedo, Vasco Bioinformation Hypothesis Turritopsis nutricula (T. nutricula) is the one of the known reported organisms that can revert its life cycle to the polyp stage even after becoming sexually mature, defining itself as the only immortal organism in the animal kingdom. Therefore, the animal is having prime importance in basic biological, aging, and biomedical researches. However, till date, the genome of this organism has not been sequenced and even there is no molecular phylogenetic study to reveal its close relatives. Here, using phylogenetic analysis based on available 16s rRNA gene and protein sequences of Cytochrome oxidase subunit-I (COI or COX1) of T. nutricula, we have predicted the closest relatives of the organism. While we found Nemopsis bachei could be closest organism based on COX1 gene sequence; T. dohrnii may be designated as the closest taxon to T. nutricula based on rRNA. Moreover, we have figured out four species that showed similar root distance based on COX1 protein sequence. Biomedical Informatics 2014-09-30 /pmc/articles/PMC4209368/ /pubmed/25352727 http://dx.doi.org/10.6026/97320630010586 Text en © 2014 Biomedical Informatics This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited.
spellingShingle Hypothesis
Devarapalli, Pratap
Kumavath, Ranjith N
Barh, Debmalya
Azevedo, Vasco
The conserved mitochondrial gene distribution in relatives of Turritopsis nutricula, an immortal jellyfish
title The conserved mitochondrial gene distribution in relatives of Turritopsis nutricula, an immortal jellyfish
title_full The conserved mitochondrial gene distribution in relatives of Turritopsis nutricula, an immortal jellyfish
title_fullStr The conserved mitochondrial gene distribution in relatives of Turritopsis nutricula, an immortal jellyfish
title_full_unstemmed The conserved mitochondrial gene distribution in relatives of Turritopsis nutricula, an immortal jellyfish
title_short The conserved mitochondrial gene distribution in relatives of Turritopsis nutricula, an immortal jellyfish
title_sort conserved mitochondrial gene distribution in relatives of turritopsis nutricula, an immortal jellyfish
topic Hypothesis
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4209368/
https://www.ncbi.nlm.nih.gov/pubmed/25352727
http://dx.doi.org/10.6026/97320630010586
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