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3D Texture Analysis in Renal Cell Carcinoma Tissue Image Grading

One of the most significant processes in cancer cell and tissue image analysis is the efficient extraction of features for grading purposes. This research applied two types of three-dimensional texture analysis methods to the extraction of feature values from renal cell carcinoma tissue images, and...

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Autores principales: Kim, Tae-Yun, Cho, Nam-Hoon, Jeong, Goo-Bo, Bengtsson, Ewert, Choi, Heung-Kook
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4209774/
https://www.ncbi.nlm.nih.gov/pubmed/25371701
http://dx.doi.org/10.1155/2014/536217
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author Kim, Tae-Yun
Cho, Nam-Hoon
Jeong, Goo-Bo
Bengtsson, Ewert
Choi, Heung-Kook
author_facet Kim, Tae-Yun
Cho, Nam-Hoon
Jeong, Goo-Bo
Bengtsson, Ewert
Choi, Heung-Kook
author_sort Kim, Tae-Yun
collection PubMed
description One of the most significant processes in cancer cell and tissue image analysis is the efficient extraction of features for grading purposes. This research applied two types of three-dimensional texture analysis methods to the extraction of feature values from renal cell carcinoma tissue images, and then evaluated the validity of the methods statistically through grade classification. First, we used a confocal laser scanning microscope to obtain image slices of four grades of renal cell carcinoma, which were then reconstructed into 3D volumes. Next, we extracted quantitative values using a 3D gray level cooccurrence matrix (GLCM) and a 3D wavelet based on two types of basis functions. To evaluate their validity, we predefined 6 different statistical classifiers and applied these to the extracted feature sets. In the grade classification results, 3D Haar wavelet texture features combined with principal component analysis showed the best discrimination results. Classification using 3D wavelet texture features was significantly better than 3D GLCM, suggesting that the former has potential for use in a computer-based grading system.
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spelling pubmed-42097742014-11-04 3D Texture Analysis in Renal Cell Carcinoma Tissue Image Grading Kim, Tae-Yun Cho, Nam-Hoon Jeong, Goo-Bo Bengtsson, Ewert Choi, Heung-Kook Comput Math Methods Med Research Article One of the most significant processes in cancer cell and tissue image analysis is the efficient extraction of features for grading purposes. This research applied two types of three-dimensional texture analysis methods to the extraction of feature values from renal cell carcinoma tissue images, and then evaluated the validity of the methods statistically through grade classification. First, we used a confocal laser scanning microscope to obtain image slices of four grades of renal cell carcinoma, which were then reconstructed into 3D volumes. Next, we extracted quantitative values using a 3D gray level cooccurrence matrix (GLCM) and a 3D wavelet based on two types of basis functions. To evaluate their validity, we predefined 6 different statistical classifiers and applied these to the extracted feature sets. In the grade classification results, 3D Haar wavelet texture features combined with principal component analysis showed the best discrimination results. Classification using 3D wavelet texture features was significantly better than 3D GLCM, suggesting that the former has potential for use in a computer-based grading system. Hindawi Publishing Corporation 2014 2014-10-09 /pmc/articles/PMC4209774/ /pubmed/25371701 http://dx.doi.org/10.1155/2014/536217 Text en Copyright © 2014 Tae-Yun Kim et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Kim, Tae-Yun
Cho, Nam-Hoon
Jeong, Goo-Bo
Bengtsson, Ewert
Choi, Heung-Kook
3D Texture Analysis in Renal Cell Carcinoma Tissue Image Grading
title 3D Texture Analysis in Renal Cell Carcinoma Tissue Image Grading
title_full 3D Texture Analysis in Renal Cell Carcinoma Tissue Image Grading
title_fullStr 3D Texture Analysis in Renal Cell Carcinoma Tissue Image Grading
title_full_unstemmed 3D Texture Analysis in Renal Cell Carcinoma Tissue Image Grading
title_short 3D Texture Analysis in Renal Cell Carcinoma Tissue Image Grading
title_sort 3d texture analysis in renal cell carcinoma tissue image grading
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4209774/
https://www.ncbi.nlm.nih.gov/pubmed/25371701
http://dx.doi.org/10.1155/2014/536217
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