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Development of a Univariate Membrane-Based Mid-Infrared Method for Protein Quantitation and Total Lipid Content Analysis of Biological Samples

Biological samples present a range of complexities from homogeneous purified protein to multicomponent mixtures. Accurate qualification of such samples is paramount to downstream applications. We describe the development of an MIR spectroscopy-based analytical method offering simultaneous protein qu...

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Autores principales: Strug, Ivona, Utzat, Christopher, Cappione, Amedeo, Gutierrez, Sara, Amara, Ryan, Lento, Joseph, Capito, Florian, Skudas, Romas, Chernokalskaya, Elena, Nadler, Timothy
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4211209/
https://www.ncbi.nlm.nih.gov/pubmed/25371845
http://dx.doi.org/10.1155/2014/657079
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author Strug, Ivona
Utzat, Christopher
Cappione, Amedeo
Gutierrez, Sara
Amara, Ryan
Lento, Joseph
Capito, Florian
Skudas, Romas
Chernokalskaya, Elena
Nadler, Timothy
author_facet Strug, Ivona
Utzat, Christopher
Cappione, Amedeo
Gutierrez, Sara
Amara, Ryan
Lento, Joseph
Capito, Florian
Skudas, Romas
Chernokalskaya, Elena
Nadler, Timothy
author_sort Strug, Ivona
collection PubMed
description Biological samples present a range of complexities from homogeneous purified protein to multicomponent mixtures. Accurate qualification of such samples is paramount to downstream applications. We describe the development of an MIR spectroscopy-based analytical method offering simultaneous protein quantitation (0.25–5 mg/mL) and analysis of total lipid or detergent species, as well as the identification of other biomolecules present in biological samples. The method utilizes a hydrophilic PTFE membrane engineered for presentation of aqueous samples in a dried format compatible with fast infrared analysis. Unlike classical quantification techniques, the reported method is amino acid sequence independent and thus applicable to complex samples of unknown composition. By comparison to existing platforms, this MIR-based method enables direct quantification using minimal sample volume (2 µL); it is well-suited where repeat access and limited sample size are critical parameters. Further, accurate results can be derived without specialized training or knowledge of IR spectroscopy. Overall, the simplified application and analysis system provides a more cost-effective alternative to high-throughput IR systems for research laboratories with minimal throughput demands. In summary, the MIR-based system provides a viable alternative to current protein quantitation methods; it also uniquely offers simultaneous qualification of other components, notably lipids and detergents.
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spelling pubmed-42112092014-11-04 Development of a Univariate Membrane-Based Mid-Infrared Method for Protein Quantitation and Total Lipid Content Analysis of Biological Samples Strug, Ivona Utzat, Christopher Cappione, Amedeo Gutierrez, Sara Amara, Ryan Lento, Joseph Capito, Florian Skudas, Romas Chernokalskaya, Elena Nadler, Timothy J Anal Methods Chem Research Article Biological samples present a range of complexities from homogeneous purified protein to multicomponent mixtures. Accurate qualification of such samples is paramount to downstream applications. We describe the development of an MIR spectroscopy-based analytical method offering simultaneous protein quantitation (0.25–5 mg/mL) and analysis of total lipid or detergent species, as well as the identification of other biomolecules present in biological samples. The method utilizes a hydrophilic PTFE membrane engineered for presentation of aqueous samples in a dried format compatible with fast infrared analysis. Unlike classical quantification techniques, the reported method is amino acid sequence independent and thus applicable to complex samples of unknown composition. By comparison to existing platforms, this MIR-based method enables direct quantification using minimal sample volume (2 µL); it is well-suited where repeat access and limited sample size are critical parameters. Further, accurate results can be derived without specialized training or knowledge of IR spectroscopy. Overall, the simplified application and analysis system provides a more cost-effective alternative to high-throughput IR systems for research laboratories with minimal throughput demands. In summary, the MIR-based system provides a viable alternative to current protein quantitation methods; it also uniquely offers simultaneous qualification of other components, notably lipids and detergents. Hindawi Publishing Corporation 2014 2014-10-13 /pmc/articles/PMC4211209/ /pubmed/25371845 http://dx.doi.org/10.1155/2014/657079 Text en Copyright © 2014 Ivona Strug et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Strug, Ivona
Utzat, Christopher
Cappione, Amedeo
Gutierrez, Sara
Amara, Ryan
Lento, Joseph
Capito, Florian
Skudas, Romas
Chernokalskaya, Elena
Nadler, Timothy
Development of a Univariate Membrane-Based Mid-Infrared Method for Protein Quantitation and Total Lipid Content Analysis of Biological Samples
title Development of a Univariate Membrane-Based Mid-Infrared Method for Protein Quantitation and Total Lipid Content Analysis of Biological Samples
title_full Development of a Univariate Membrane-Based Mid-Infrared Method for Protein Quantitation and Total Lipid Content Analysis of Biological Samples
title_fullStr Development of a Univariate Membrane-Based Mid-Infrared Method for Protein Quantitation and Total Lipid Content Analysis of Biological Samples
title_full_unstemmed Development of a Univariate Membrane-Based Mid-Infrared Method for Protein Quantitation and Total Lipid Content Analysis of Biological Samples
title_short Development of a Univariate Membrane-Based Mid-Infrared Method for Protein Quantitation and Total Lipid Content Analysis of Biological Samples
title_sort development of a univariate membrane-based mid-infrared method for protein quantitation and total lipid content analysis of biological samples
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4211209/
https://www.ncbi.nlm.nih.gov/pubmed/25371845
http://dx.doi.org/10.1155/2014/657079
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